Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci526g0001 ATGAAAACGATGAAAGGAGGAGAAGGGAACGAGTACAAGAAAGGACTGTGGACGGAGGAAGAAGACAGGGTTTTGATGGAATACATTGGAGTTCATGGAAGAAAGCACTGGAACCGCATTTCCAAAGTCACTGGTTTGATGAGGAGTGGGAAGAGCTGCAGGTTAAGATGGCTCAACTATCTCAGTCCAAACGTCAAACATGGCAGTTTTACAGAGGAAGAAGACGACCTCATCATTCGACTCCATAATCTTCTTGGAAACAGGTGGTCTCTAATAGCTGGAAGGGTGCCTGGAAGAACAGACAATCAAGTAAAGAATCATTGGAACACTCATTTGTGCAAGAAACTTGGAATTACTAAGCAAACCAAAAGACCCATGAAACATAAAGAATCTTCAAAATCTAGTGCTTCACAATTAGAAGAGGCTCGAAATGTTCACACATCTCTAGATTCTATGCCTGTGATTCCTCTTGCTCTCAACCATAAAGGCAAAGAAGCTGAGATACAAGGTCAAGGAAGCCGCATGAGCAACAATAATTCTATGACAAATGTTGAAGAAGCACAACATTGTTGGCCATCTACGGAAAAAGATCACTTTGACCAAGCTTTTATGTTTAATGATGATCATACCTTTGTTCTACACAGTCCTCCCAGGTTAATGGAATTCTTTGATGGATTTGATATGATTTAA 690 0.4058 MKTMKGGEGNEYKKGLWTEEEDRVLMEYIGVHGRKHWNRISKVTGLMRSGKSCRLRWLNYLSPNVKHGSFTEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLCKKLGITKQTKRPMKHKESSKSSASQLEEARNVHTSLDSMPVIPLALNHKGKEAEIQGQGSRMSNNNSMTNVEEAQHCWPSTEKDHFDQAFMFNDDHTFVLHSPPRLMEFFDGFDMI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci526g0001 229 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Prci526g0001 229 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci526g0001 229 CDD SANT 69 112 IPR001005 -
Prci526g0001 229 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 10 182 - -
Prci526g0001 229 MobiDBLite consensus disorder prediction 120 145 - -
Prci526g0001 229 FunFam Transcription factor WER 68 142 - -
Prci526g0001 229 FunFam Myb transcription factor 14 66 - -
Prci526g0001 229 SMART sant 13 63 IPR001005 -
Prci526g0001 229 SMART sant 66 114 IPR001005 -
Prci526g0001 229 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Prci526g0001 229 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci526g0001 229 CDD SANT 17 61 IPR001005 -
Prci526g0001 229 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci526g0001 229 Gene3D - 68 144 - -
Prci526g0001 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci526g0001 229 Gene3D - 14 66 - -
Prci526g0001 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci526g0001 1 226 MYB Transcription Factor Family AT5G40330 45.815 8.02e-62 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci526g0001 Myb_DNA-binding 2.4e-13 CL0123