Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci519g0003 ATGCTCTCGAGATCTTGCTTAGACTTGTTGAATTTGATCTCCATCGATGATTACCGGACTCTGAGCGGGATACCGAACGACATGACGCTCCCGGGAGTGGTGCCCGAATTCCAAGTCCGCGATGATGCCGATTCCGGTGCGGGTTCCGACGGCATCGTCTCCTCTGTTCCGCAAGAACGCAGAATCATCGTCGCCAATCAGTTGCCGATAAAATCGTTTCTTGATAGCGAGACCAGAAAATGGAGTTTCGAATTGGACAGTGATAATCTCTATCTGCAGCTCAAAGACGGGTTTCCCTCCGACGTCGAAGTTCTCTATGTGGGTTCTTTGAAAGCCGACATCGATCCGTCGGAACAAGACGAAGTGTCCCAAATATTACTCGAAAAGTTCCGATGCGTGCCAACGTTTTTGCCTCTCGAGATTCAGAATAAGTTCTACCATGGATTCTGCAAGCATTACCTCTGGCCTCTGTTTCACTACATGTTACCGATGTCGCCGAGTCACGGTGCCCGTTTTGAACTAGCGCAGTGGAAAGCCTACGTTTACGCCAACAAGGTTTTCGCCGATAAGGTAATGGAGGTGATAAACCCGGAGGAGGATTACGTTTGGATTCACGATTATCATCTCATGATCTTGCCTACCTTATTGAGAAGACGGTTTCACAGGGTCAAACTCGGGTTTTTCCTTCATAGCCCATTTCCGTCTTCTGAAATCTATAGAACAATTCCAGTTCGTGATGATATCCTTCGGGCTCTGTTAAATTGCGATTTAGTCGGTTTCCACACGTTTGATTACGCGAGACATTTCTTGTCCTGTTGCAGTAGAATGTTGGGGTTGGATTATGAGTCCAAGAGGGGTTACATTGGGCTAGATTATTACGGTCGAACAGTAACTATCAAGATCTTGCCGGTGGGGATTCACATGGGTCAGCTCCAATCGCTGTTGTCGATGTCTCATACCGGTGACAGGATTGAAGAATTGAAGAAACAATACGATGGGAAGGTCGTTATTTTGGGTGTGGATGATATGGATTTGTTCAAAGGCTTGAGCTTGAAGTTACTGGCAATGGGACAACTCTTGGAAGTGCACGAAGAATTAAGGGGTAAAGTAGTTTTAGTCCAGATTCTGAACCCAGCAAGAAGCAGAGGGAAAGATATTCAAGATGTTCAAAACGAAACAAATTCTATCGCGAATGAGATCAACGAGAAATACGGCGAACCTGGGTACCAGCCAGTTGTGTTCATTAACGGCCCTGTTTCGACGCAGGAGAAAGCCTCCTACTACGCCATTTCTGAATGCTGCGTTGTGAATGCTGTGAGAGATGGTATGAATTTAGTGCCTTATAAGTACACTGTTTGTAGACAGGGGATCGATGCAAATGATTCGACGAGTCCTAAACGAAGCGTCATCATAGTGTCTGAATTCATCGGTTGTTCTCCGTCGCTGAGCGGAGCAATCAGAGTGAACCCGTGGAACATCGAAGACGTCGCAGAGGCAATGAACTCGGCGATTACGATGTCAGAGGCAGAGAAACAGTTGCGTCACGAGAAGCATTACAAGTACATAAGCTCACATGATGTAGCCTATTGGGCTAGGAGTTTCGATCAGGACTTAGAGAGGGCTTGTAGAGAGCATTACCGTAAGAGGTGTTGGGGTGTTGGTTTTGGCTTGGGGTTTAGAATCGTAGCTCTCGATCCTACATTCAGGAAGCTTTCAGCGGAAAGCATCATGTCTGCTTATAGAAACACACACAGCAGGTTGATCCTTTTAGACTACGATGGTACTATGATGCCCGGGGTATCTGTTGACAAAACCCCAAGCGAAGAAGTTATTTCTGTGTTGAATCGCTTATGCAGTGACCCTAGAAACGCGGTGTTCATTGTCAGTGGCAGAGACAAGAATTGCCTCAGCAAGTGGTTCTCTCCGTGCGAGAAGCTGGGCCTCTCAGCAGAACATGGCTTCTTTACCAGGTGGAGTTGTGATAGCCCGTGGGAGACATGTGGATTAGGAATGGATTTCGAATGGAAAAAAGCTGTAGAACCGGTGATGGCTCATTATACAGAAGCAACAGACGGTTCTTTCATTGAACCAAAGGAGAGTGCTTTGGTTTGGCACCACCAAGAAGCCGACCCTCATTTCGGATCCTGCCAAGCAAAAGAGCTTCTTGATCACCTCGAGAGCGTGCTTGCCAATGAACCAGTAGTTGTCAAAAGAGGACAGCACATCGTTGAAGTGAAACCTCAGGGTGTGAGCAAAGGCATAGTAGTGGAAAATCTAATCTCAACGATGCTGAGTAAGGGAAAGGCGCCAGATTTTCTTTTGTGCATAGGAGACGATAGGTCAGATGAAGATATGTTTGAGAGCGTTGCTCGTTCAACCTCTGATCCAAGCCTACCAAGCATAGCACATGTCTATGCCTGCACTGTGGGTCAGAAGCCAAGTATGGCAAAATGTTATCTGGACGACACTGTTGAAGTCATCAAGTTACTTCAAGGACTAGCCACTGCATCATCATCATCGCCCACAAAGTCCCTACAATCTCAGGAACTGCAAGTATCTTGA 2562 0.4668 MLSRSCLDLLNLISIDDYRTLSGIPNDMTLPGVVPEFQVRDDADSGAGSDGIVSSVPQERRIIVANQLPIKSFLDSETRKWSFELDSDNLYLQLKDGFPSDVEVLYVGSLKADIDPSEQDEVSQILLEKFRCVPTFLPLEIQNKFYHGFCKHYLWPLFHYMLPMSPSHGARFELAQWKAYVYANKVFADKVMEVINPEEDYVWIHDYHLMILPTLLRRRFHRVKLGFFLHSPFPSSEIYRTIPVRDDILRALLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLQSLLSMSHTGDRIEELKKQYDGKVVILGVDDMDLFKGLSLKLLAMGQLLEVHEELRGKVVLVQILNPARSRGKDIQDVQNETNSIANEINEKYGEPGYQPVVFINGPVSTQEKASYYAISECCVVNAVRDGMNLVPYKYTVCRQGIDANDSTSPKRSVIIVSEFIGCSPSLSGAIRVNPWNIEDVAEAMNSAITMSEAEKQLRHEKHYKYISSHDVAYWARSFDQDLERACREHYRKRCWGVGFGLGFRIVALDPTFRKLSAESIMSAYRNTHSRLILLDYDGTMMPGVSVDKTPSEEVISVLNRLCSDPRNAVFIVSGRDKNCLSKWFSPCEKLGLSAEHGFFTRWSCDSPWETCGLGMDFEWKKAVEPVMAHYTEATDGSFIEPKESALVWHHQEADPHFGSCQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISTMLSKGKAPDFLLCIGDDRSDEDMFESVARSTSDPSLPSIAHVYACTVGQKPSMAKCYLDDTVEVIKLLQGLATASSSSPTKSLQSQELQVS 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci519g0003 853 Gene3D Glycogen Phosphorylase B; 54 312 - -
Prci519g0003 853 Gene3D - 669 748 - -
Prci519g0003 853 FunFam Trehalose-6-phosphate synthase 2 669 748 - -
Prci519g0003 853 FunFam Alpha,alpha-trehalose-phosphate synthase 314 523 - -
Prci519g0003 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Prci519g0003 853 Pfam Glycosyltransferase family 20 60 539 IPR001830 GO:0003824|GO:0005992
Prci519g0003 853 CDD HAD_TPP 587 828 - -
Prci519g0003 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 585 702 - -
Prci519g0003 853 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 49 835 IPR001830 GO:0003824|GO:0005992
Prci519g0003 853 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 715 847 - -
Prci519g0003 853 SUPERFAMILY HAD-like 586 834 IPR036412 -
Prci519g0003 853 NCBIfam HAD-IIB family hydrolase 587 789 IPR006379 -
Prci519g0003 853 CDD GT20_TPS 60 539 IPR001830 GO:0003824|GO:0005992
Prci519g0003 853 Gene3D - 588 819 IPR023214 -
Prci519g0003 853 NCBIfam trehalose-phosphatase 585 834 IPR003337 GO:0003824|GO:0005992
Prci519g0003 853 Gene3D Glycogen Phosphorylase B; 313 523 - -
Prci519g0003 853 Pfam Trehalose-phosphatase 589 822 IPR003337 GO:0003824|GO:0005992
Prci519g0003 853 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 543 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci519g0003 1 848 Trehalose Biosynthesis Gene Families AT2G18700 66.938 0.0 1196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci519g0003 K16055 - qsa:O6P43_002917 1389.02