Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci519g0001 ATGCCTCCTCCTAGTCCTCCTATTCCTCACCATGAACAAAGCCAACCAAAACCCAGCCCCAGGCTTCTCTCCATCTTCCTTAAAGCCATCATCATGACCCTTCTCACCTCCGTCTTTTTCATCTTCCTTGGCTTCGCCGCCTTCGTTCTCCTCCATCTCTGCTTCATCGGCGGCATCCTCCACCGCCTCCGCTCTCGCCCCACCGTCCAACTCGGGGCTTCCTCCAATGGAATCGCGCCGCGTGACGTAAAGAAGCTTCCCCACTTCCGGGTTGCTAGCGGGACCGAACCCGGACCCGAAACCCAATGCGTTGTCTGCTTGGACGGCTTCCGCAGCGGCCACTGGTGCAGAAAGCTCGCCGGATGTGGTCATGTGTTCCACCGGAGATGTGTGGATACCTGGTTGGTGAAGGTGGCTGCGTGTCCTACGTGCAGGACACCTGTTCGATCAAAAGCAGGAGGGGATGTAGGTTCGCGTCTAGATGTCGATAGGGATGAGGCTATGCGACTTCGAACATCCAGTAGGGATAGTGCTTTTAGGATTTTTTAA 549 0.5592 MPPPSPPIPHHEQSQPKPSPRLLSIFLKAIIMTLLTSVFFIFLGFAAFVLLHLCFIGGILHRLRSRPTVQLGASSNGIAPRDVKKLPHFRVASGTEPGPETQCVVCLDGFRSGHWCRKLAGCGHVFHRRCVDTWLVKVAACPTCRTPVRSKAGGDVGSRLDVDRDEAMRLRTSSRDSAFRIF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci519g0001 182 Pfam Ring finger domain 102 145 IPR001841 -
Prci519g0001 182 SMART ring_2 103 144 IPR001841 -
Prci519g0001 182 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 10 158 - -
Prci519g0001 182 SUPERFAMILY RING/U-box 98 151 - -
Prci519g0001 182 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Prci519g0001 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 153 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci519g0001 17 149 C3H Transcription Factor Family AT2G18670 46.269 2.53e-32 112