Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci515g0006 ATGGGCTGTGTGTTCGGAAGAGAGGCGTCGGCGAAGTTCGCCGGAGAGACAGTGTCGGAGAGGGAGGAGAGGAAAGAGGTAGTTACAGCTGCGAAAGCAGGAGCGAGTGAGGTTCCAAATAGTGGGAATCGGAAGGAAGGTGGTGGAGAGGAGAAGAGTGCACGGCCAAGAGGGGAACGGCGGCGATCGTCGAGGCCAAATCCGAGGCTGAGCAATCCACCGAATCATGTACATGGCGAGCAAGTGGCGGCGGGATGGCCCGCTTGGCTCTCCAAGGTTGCAGGGGAAGCCATCGATGGGTTGACGCCTAGAAGAGCAGACACTTTTGAAAAGCTTGATAAGATTGGCCAAGGCACATACAGTAATGTTTACAAAGCCAGAGATACTTTAACCGGGAAAATTGTTGCCTTAAAAAAGGTTCGATTTGACAATTTGGAGCCAGAGAGTGTGAAATTCATGGCCCGAGAGATTCTTATATTACGTCGTCTTGATCATCCCAATGTTGTTAAACTGGAAGGCTTAGTGACTTCTAGAATGTCATGTAGCTTGTATCTTGTTTTTCAATACATGGAGCATGATCTGGCAGGACTTGCTACAAGCCCATCAATTAAGTTCACTGAGCCTCAGGTTAAATGTTACATGAAGCAGTTGTTTTCTGGTCTGGAACACTGCCACAACTGTCATGTGCTTCATCGAGATATAAAGGGGTCAAACCTTCTTATTGACAATGAAGGGATCCTTAAAATTGCTGATTTTGGATTAGCTTGCTCCTTCGAACCTGATCACAAGCACCCTATGACAAGTAGGGTGGTGACTTTATGGTATCGACCTCCAGAACTTCTTCTCGGGGCCACTGATTATGGCGTAGGAGTGGACCTCTGGAGTGCTGGCTGCATTCTTGGAGAATTGTTGGCTGGAAAGCCAATTTTACCTGGTCGAACAGAGGTGGAGCAGCTACATAAGATATTTAAGCTATGTGGTTCTCCTTCTGAAGAGTATTGGAAAAAGTCAAAGTTGCCGCATGCTACAATTTTTAAGCCTCAACAATCATACAAGCGATGCATATCAGAGGTATTCAAAGATTTTCCACCATCATCCTTGCCACTAATTGAGACCCTTCTTGCAATCGATCCAGCTGAACGTCAGACTGCCACTGCTGCATTGCAAAGTGAATTCTTTACTACAAAACCTTATGCTTGTGAGCCATCAAGCCTTCCAAAATATCCTCCTAGCAAGGAGATGGATGCAAAGCTACGTGATGAAGAAGCTAGAAGATTGAGAGCAGCAGGTAAAGCTAATGCTGATGGTGGCAAGAAATATCGTCCACGTGACCGGGGAGGGAGGGGAATTCCAGTTCCAGAAGCCAATGCTGAGCTTCAAGCAAATATTGATAGACGACGATTGATAACGCATGCAAATGCAAAGAGCAAGAGCGAGAAGTTTCCTCCGCCGCACCAAGACGGAACTCTAGGCTATACTCTGGGTTCTTCACATCACATGGATCCAGTTTTTGACCCTCCTGATGTTTCCTTTAGCTCTACAAACTTGTCATACCCTAAAGCCAATATTCAAACTTGGTCTGGTCCCTTGGTGGAACCTGCTGCCCCGAGGAGAAAGAAGAGCATGGCAGGAGCATCCAAATCATCAAAAAAGGACTCCAGAAGATGA 1668 0.467 MGCVFGREASAKFAGETVSEREERKEVVTAAKAGASEVPNSGNRKEGGGEEKSARPRGERRRSSRPNPRLSNPPNHVHGEQVAAGWPAWLSKVAGEAIDGLTPRRADTFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFQYMEHDLAGLATSPSIKFTEPQVKCYMKQLFSGLEHCHNCHVLHRDIKGSNLLIDNEGILKIADFGLACSFEPDHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILGELLAGKPILPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCISEVFKDFPPSSLPLIETLLAIDPAERQTATAALQSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADGGKKYRPRDRGGRGIPVPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGTLGYTLGSSHHMDPVFDPPDVSFSSTNLSYPKANIQTWSGPLVEPAAPRRKKSMAGASKSSKKDSRR 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci515g0006 555 MobiDBLite consensus disorder prediction 508 524 - -
Prci515g0006 555 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Prci515g0006 555 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci515g0006 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Prci515g0006 555 PANTHER CELL DIVISION PROTEIN KINASE 107 397 - -
Prci515g0006 555 MobiDBLite consensus disorder prediction 428 555 - -
Prci515g0006 555 FunFam probable serine/threonine-protein kinase At1g54610 96 191 - -
Prci515g0006 555 CDD STKc_CDK9_like 109 393 - -
Prci515g0006 555 MobiDBLite consensus disorder prediction 1 79 - -
Prci515g0006 555 MobiDBLite consensus disorder prediction 460 482 - -
Prci515g0006 555 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci515g0006 555 Gene3D Phosphorylase Kinase; domain 1 97 191 - -
Prci515g0006 555 MobiDBLite consensus disorder prediction 44 66 - -
Prci515g0006 555 FunFam probable serine/threonine-protein kinase At1g54610 192 433 - -
Prci515g0006 555 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci515g0006 555 Gene3D Transferase(Phosphotransferase) domain 1 192 432 - -
Prci515g0006 555 MobiDBLite consensus disorder prediction 14 30 - -
Prci515g0006 555 SUPERFAMILY Protein kinase-like (PK-like) 104 398 IPR011009 -
Prci515g0006 555 MobiDBLite consensus disorder prediction 428 448 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci515g0006 104 431 Core Cell Cycle Gene Families AT5G10270 52.907 2.17e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci515g0006 Pkinase 1.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci515g0006 K08819 - qsa:O6P43_003509 934.865