Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci515g0005 ATGGGCTGTGTGTTCGGAAGAGAGGCGTCGGCGAAGTTCGCCGGAGAGACAGTGTCGGAGAGGGAGGAGAGGAAAGAGGTAGTTACAGCTGCGAAAGCAGGAGCGAGTGAGGTTCCAAATAGTGGGAATCGGAAGGAAGGTGGTGGAGAGGAGAAGAGTGCACGGCCAAGAGGGGAACGGCGGCGATCGTCGAGGCCAAATCCGAGGCTGAGCAATCCACCGAATCATGTACATGGCGAGCAAGTGGCGGCGGGATGGCCCGCTTGGCTCTCCAAGGTTGCAGGGGAAGCCATCGATGGGTTGACGCCTAGAAGAGCAGACACTTTTGAAAAGCTTGATAAGGTTAAATGTTACATGAAGCAGTTGTTTTCTGGTCTGGAACACTGCCACAACTGTCATGTGCTTCATCGAGATATAAAGGGGTCAAACCTTCTTATTGACAATGAAGGGATCCTTAAAATTGCTGATTTTGGATTAGCTTGCTCCTTCGAACCTGATCACAAGCACCCTATGACAAGTAGGGTGGTGACTTTATGGTATCGACCTCCAGAACTTCTTCTCGGGGCCACTGATTATGGCGTAGGAGTGGACCTCTGGAGTGCTGGCTGCATTCTTGGAGAATTGTTGGCTGGAAAGCCAATTTTACCTGGTCGAACAGAGGTGGAGCAGCTACATAAGATATTTAAGCTATGTGGTTCTCCTTCTGAAGAGTATTGGAAAAAGTCAAAGTTGCCGCATGCTACAATTTTTAAGCCTCAACAATCATACAAGCGATGCATATCAGAGGTATTCAAAGATTTTCCACCATCATCCTTGCCACTAATTGAGACCCTTCTTGCAATCGATCCAGCTGAACGTCAGACTGCCACTGCTGCATTGCAAAGTGAATTCTTTACTACAAAACCTTATGCTTGTGAGCCATCAAGCCTTCCAAAATATCCTCCTAGCAAGGAGATGGATGCAAAGCTACGTGATGAAGAAGCTAGAAGATTGAGAGCAGCAGGTAAAGCTAATGCTGATGGTGGCAAGAAATATCGTCCACGTGACCGGGGAGGGAGGGGAATTCCAGTTCCAGAAGCCAATGCTGAGCTTCAAGCAAATATTGATAGACGACGATTGATAACGCATGCAAATGCAAAGAGCAAGAGCGAGAAGTTTCCTCCGCCGCACCAAGACGGAACTCTAGGCTATACTCTGGGTTCTTCACATCACATGGATCCAGTTTTTGACCCTCCTGATGTTTCCTTTAGCTCTACAAACTTGTCATACCCTAAAGCCAATATTCAAACTTGGTCTGGTCCCTTGGTGGAACCTGCTGCCCCGAGGAGAAAGAAGAGCATGGCAGGAGCATCCAAATCATCAAAAAAGGACTCCAGAAGATGA 1383 0.4801 MGCVFGREASAKFAGETVSEREERKEVVTAAKAGASEVPNSGNRKEGGGEEKSARPRGERRRSSRPNPRLSNPPNHVHGEQVAAGWPAWLSKVAGEAIDGLTPRRADTFEKLDKVKCYMKQLFSGLEHCHNCHVLHRDIKGSNLLIDNEGILKIADFGLACSFEPDHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILGELLAGKPILPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCISEVFKDFPPSSLPLIETLLAIDPAERQTATAALQSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADGGKKYRPRDRGGRGIPVPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGTLGYTLGSSHHMDPVFDPPDVSFSSTNLSYPKANIQTWSGPLVEPAAPRRKKSMAGASKSSKKDSRR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci515g0005 460 MobiDBLite consensus disorder prediction 333 353 - -
Prci515g0005 460 SMART serkin_6 12 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci515g0005 460 ProSiteProfiles Protein kinase domain profile. 1 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci515g0005 460 MobiDBLite consensus disorder prediction 1 78 - -
Prci515g0005 460 SUPERFAMILY Protein kinase-like (PK-like) 111 303 IPR011009 -
Prci515g0005 460 Gene3D Transferase(Phosphotransferase) domain 1 107 337 - -
Prci515g0005 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Prci515g0005 460 Pfam Protein kinase domain 113 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci515g0005 460 PANTHER CELL DIVISION PROTEIN KINASE 109 302 - -
Prci515g0005 460 MobiDBLite consensus disorder prediction 413 429 - -
Prci515g0005 460 MobiDBLite consensus disorder prediction 44 66 - -
Prci515g0005 460 MobiDBLite consensus disorder prediction 365 387 - -
Prci515g0005 460 MobiDBLite consensus disorder prediction 14 30 - -
Prci515g0005 460 FunFam probable serine/threonine-protein kinase At1g54610 97 338 - -
Prci515g0005 460 MobiDBLite consensus disorder prediction 333 460 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci515g0005 98 336 Core Cell Cycle Gene Families AT5G10270 53.750 3.75e-82 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci515g0005 Pkinase 3.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci515g0005 K08819 - qsa:O6P43_003509 611.683