Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci514g0001 ATGACGCCTCCACTTAAACACTCGCTGTCGCTCCGTCACAAGGAAGTCTCAAATTTTCTAGCGAGAGAAACTGTTGCTGCCATGGCTGCTCCTAATCCTACGCACCTCCCGGACCACTTCAAGTGTCCGATTTCGCTCGAGATAATGTCCGACCCGGTTATCCTGTCTTCGGGTCACACCTTCGACCGGTCTTCAATCCAGCGCTGGCTCGACGCCGGCCACCGGACTTGTCCGATTACCAAACTACCCCTCCCTGATTGCCCTTCCCTCATCCCCAATCACGCTCTCAGAAGCTTGATTTCAAGCTATTATCATATCTCATCATTCAAGCAGCATCCTCCTCCCCAACCGGAAACCCTAGTTTTTTCCATTACCTCTCGCTCGTCGTCGCTGGAGAGCAGAATTGAATTGCTGGACCAACTTACGCGCCTTTCCAAGCGTGACTCAGTTTTCCGTCGGCGGTTGACTGAGTCAGGAGTCGTGTCGGCGGTGCTGCACTGCGTTGACTCTGGTGAGCCTAGTCTACAGGAGAAAGCGCTTTCGTTGTTGCTCAACCTTAGTCTCGACGACGATAACAAGGTGGGTTTGGTGGCGGAGGGTGCGATCGGGAAGGTTGTGGCTGTTCTGTTAGGTGGCTCATCGGATTGCCGAGCAGTGGCGGCAACCATGTTGACGAGTTTGGCGGTCGTGGAGGTGAACAAAGCCACCATTGGTGCGTATCCGTATGCTATAGGAGCTCTTGTTTCTCTTCTTCGAGATGGTGAAGGCAGAGAGAAGAAAGAAGCGGCCACAGCGCTCTATGCTATATGTTCTTTTCCAGATAATCGTAGGAGAGCCGTAGAATGTGGGGCAGTCCCGATTTTGTTAAGAAGTGTTGATTCTGGTCTTGAAAGGGCTGTTGAAGTTCTTGGTGTGCTGGCTAAGTGTCGGGAAGGTAGAGAACAAATGGAAAGGTATAATGGATGCGTTCAGATTTTAGCGCGGGTGCTGAGAAATGGAAGCTCGAGGGGAATTCAATATGCCTTGTTGGCACTGAATTCCCTTTGTAATAGTGAAAAAATGGTTCTGGAGGCGACTAAAGGGGGAATTTTGGAGATTTGTCTGGGATTACTGGAGGATGATAATGAAAAAATAAGGAGAAATTCATCCAGTTTGATTAAGGTTCTGCGTGGCAATCGTAGGAAGAGTTGA 1191 0.5004 MTPPLKHSLSLRHKEVSNFLARETVAAMAAPNPTHLPDHFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITKLPLPDCPSLIPNHALRSLISSYYHISSFKQHPPPQPETLVFSITSRSSSLESRIELLDQLTRLSKRDSVFRRRLTESGVVSAVLHCVDSGEPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGKVVAVLLGGSSDCRAVAATMLTSLAVVEVNKATIGAYPYAIGALVSLLRDGEGREKKEAATALYAICSFPDNRRRAVECGAVPILLRSVDSGLERAVEVLGVLAKCREGREQMERYNGCVQILARVLRNGSSRGIQYALLALNSLCNSEKMVLEATKGGILEICLGLLEDDNEKIRRNSSSLIKVLRGNRRKS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci514g0001 396 Gene3D - 115 296 IPR011989 -
Prci514g0001 396 Gene3D - 297 390 IPR011989 -
Prci514g0001 396 FunFam RING-type E3 ubiquitin transferase 35 107 - -
Prci514g0001 396 CDD RING-Ubox_PUB 37 86 IPR045210 -
Prci514g0001 396 PANTHER U BOX DOMAIN-CONTAINING 26 387 - -
Prci514g0001 396 SMART arm_5 272 308 IPR000225 GO:0005515
Prci514g0001 396 SMART arm_5 309 350 IPR000225 GO:0005515
Prci514g0001 396 SMART arm_5 189 229 IPR000225 GO:0005515
Prci514g0001 396 SMART arm_5 148 188 IPR000225 GO:0005515
Prci514g0001 396 SUPERFAMILY RING/U-box 33 105 - -
Prci514g0001 396 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 110 IPR013083 -
Prci514g0001 396 Pfam U-box domain 37 104 IPR003613 GO:0004842|GO:0016567
Prci514g0001 396 SUPERFAMILY ARM repeat 128 389 IPR016024 -
Prci514g0001 396 SMART Ubox_2 39 103 IPR003613 GO:0004842|GO:0016567
Prci514g0001 396 ProSiteProfiles U-box domain profile. 35 110 IPR003613 GO:0004842|GO:0016567
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci514g0001 36 391 U-box Gene Family AT4G21350 61.644 8.55e-152 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci514g0001 - - pcin:129286672 739.184