Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci511g0002 ATGAGTTGCAGCTCCGGCGACAACAATGCAAGCAGGAGCAATTGCAGGGACGCAGCCGTCAAGTACAAGGGAGTCCGGCAACGGAAATGGGGCAAATGGGTGTCGGAGATTCGAGTCCCTGGGTCGCAGGAGCGGCTGTGGCTGGGCACGTTTGCCTCGCCGGAGGCGGCAGCGGTGGCTCGTGACGTGGCTTACTACTGTCTGAGGAGACCGGCGTCGTTGGACAAGCTCAACCTCCCGGGGATGCTGCCTCCTTGTTATGTCCGGCAGCCGAGGGAGATGTCGCCAAGGTCGGTGCAGGAGGCGGCCTCGAATGCCGGCATGGCTGTCGATGCGCGGAGGATTGTAGAAGCAGAAGTGAAGAATGAGAAGACTGGTGATGAGCAGAGAGAAAACAGAGAGATGAATGACGAGTTCTGGTGGGACTCGAGCGGCGGCGGCGGCGGTATATGGGATGGAATGAGTGATGGGCATACACAAGGAGAAGCACCGAGCATTTCCATTGATGATTATTTGATAGATCTTCTACATTCATAG 537 0.5717 MSCSSGDNNASRSNCRDAAVKYKGVRQRKWGKWVSEIRVPGSQERLWLGTFASPEAAAVARDVAYYCLRRPASLDKLNLPGMLPPCYVRQPREMSPRSVQEAASNAGMAVDARRIVEAEVKNEKTGDEQRENREMNDEFWWDSSGGGGGIWDGMSDGHTQGEAPSISIDDYLIDLLHS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci511g0002 178 SUPERFAMILY DNA-binding domain 21 72 IPR016177 GO:0003677
Prci511g0002 178 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Prci511g0002 178 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Prci511g0002 178 Pfam AP2 domain 21 69 IPR001471 GO:0003700|GO:0006355
Prci511g0002 178 CDD AP2 21 74 IPR001471 GO:0003700|GO:0006355
Prci511g0002 178 ProSiteProfiles AP2/ERF domain profile. 21 80 IPR001471 GO:0003700|GO:0006355
Prci511g0002 178 Gene3D AP2/ERF domain 20 80 IPR036955 GO:0003700|GO:0006355
Prci511g0002 178 SMART rav1_2 21 86 IPR001471 GO:0003700|GO:0006355
Prci511g0002 178 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 124 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci511g0002 12 127 AP2-EREBP Transcription Factor Family AT1G22810 56.034 2.79e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci511g0002 AP2 9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci511g0002 - - pcin:129313911 223.787