Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci511g0001 CATAATCGTGGGATCAATGTGAAATCGGGCCGCCTGAACATTGAAAGCAGAAGAAATAAAGATTGTTGGAGATTTGAGTACAAGGGAGTCCGGCGACGGAAATGGGGCAAGTGGGTGTCGGAGATTCGAGTCCCGGGGTCGCAGGAGCGTCTGTGGCTGGGCACGTTTGCCTCGCCGGAGGCGGCAGCGGTGGCTCGTGACGTGGCTTACTACTGTCTGAGGAGACCGGCGTCGTTGGAGAAGCTCAACCTCCCGGAGATGCTGCCTCCCTGTTATATCTGGCAGCAGAGGGAGATGTCGCCGAGGTCGGTGCAGGCGGCGGCGTCGAATGCCGGCATGGCCGTCGATGCGCAGAGGATTGTTGAAGCAGAAGGGAAGATTGAGAGGACAGATAATGAGCAGAGAGAAAACAGAGAGATGAATGACGAGTTCTGGTTGGACTAG 444 0.5653 HNRGINVKSGRLNIESRRNKDCWRFEYKGVRRRKWGKWVSEIRVPGSQERLWLGTFASPEAAAVARDVAYYCLRRPASLEKLNLPEMLPPCYIWQQREMSPRSVQAAASNAGMAVDAQRIVEAEGKIERTDNEQRENREMNDEFWLD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci511g0001 147 SMART rav1_2 26 91 IPR001471 GO:0003700|GO:0006355
Prci511g0001 147 Gene3D AP2/ERF domain 26 86 IPR036955 GO:0003700|GO:0006355
Prci511g0001 147 Pfam AP2 domain 27 74 IPR001471 GO:0003700|GO:0006355
Prci511g0001 147 ProSiteProfiles AP2/ERF domain profile. 26 85 IPR001471 GO:0003700|GO:0006355
Prci511g0001 147 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Prci511g0001 147 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Prci511g0001 147 SUPERFAMILY DNA-binding domain 27 78 IPR016177 GO:0003677
Prci511g0001 147 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 22 128 - -
Prci511g0001 147 MobiDBLite consensus disorder prediction 124 147 - -
Prci511g0001 147 CDD AP2 27 86 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci511g0001 26 117 AP2-EREBP Transcription Factor Family AT1G22810 64.130 6.73e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci511g0001 AP2 1.7e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci511g0001 - - pcin:129297410 307.76