LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci507g0002	ATGCAGACAAATATAGAAGCAGCAGAACATTTGAATGGTAACGGTACAGATGTCAAAGTCTTTTCTTTCTCTGACATTGAAAGGGCCACAAATAGATTCTCACTTGAAAATAAGATTGGAGAAGGTGGTTTTGGAGTTGTTTACAAGGGAATATTACCTGATGGAGAGGAAATAGCAGTGAAAAGACGATCAAAAGGTTCTAAGCAAGGATTTGAGGAATTCAAAAATGAGACAACACTTAATGCAAGACTGCAACATGTCAATCTTCTTCGAGTATTGGGGTTCTGCAATGACAAGGAAGAACAAATGTTGGTTTATGAGTACATGCCAAACAAAAGCCTTCAGTTCCATCTTTTTGACCCTACAAAGCAGCATCTACTAGACTGGAGACAACGTGTTTGTATCATTGAAGGAGTAACTCAAGGGCTAATCTATCTTCAAGAATATTCTAGACTGACAGTAATTCATAGAGACCTGAAAGCTAGCAATATTTTATTGGATCATGAGATGAAGCCAAAGATTTCAGACTTTGGCATGGCAAGACCATTTAAAAAAGATGAACATGAAGAAAACGCCAGTAAACTTGTAGGGACATACGGCTACATACCTCCTGAATATGTTGAGAAAGGGTTGTGCTCCATTAAATCTGATGTTTATAGCTTTGGTGTCCTCCTCCTACAAATTATTAGTGGAAAAAGGATCTCAAGCTTATATGGAGTGAGTAATGATTTGAACCTCTTAGAATATGCTTACATGTTATGGAAACAAGGAAAAGGCATGGAATTCGTGGATTATTCACTTGATGATACATCTTCTCCTTGCAAATTGATGAGATGCTTGCAAATTGCTCTCCTGTGTGTCCAGAAATATGCAGAAGATAGGCCTAGCATGCTAGAAGTTTATTTAATGCTAAGAAACGAAAGCAACTTCATAGCAAGCCCAAAACAGCCTGCATATTCAAACGTAGGGAATGAAGAGGCGTTGAAGTTTATTCAACGGCCAGAAATTTGTTCACGAAATGAAACAACAATGTCTCCAGTTTGGGGTCGATAG	1053	0.3808	MQTNIEAAEHLNGNGTDVKVFSFSDIERATNRFSLENKIGEGGFGVVYKGILPDGEEIAVKRRSKGSKQGFEEFKNETTLNARLQHVNLLRVLGFCNDKEEQMLVYEYMPNKSLQFHLFDPTKQHLLDWRQRVCIIEGVTQGLIYLQEYSRLTVIHRDLKASNILLDHEMKPKISDFGMARPFKKDEHEENASKLVGTYGYIPPEYVEKGLCSIKSDVYSFGVLLLQIISGKRISSLYGVSNDLNLLEYAYMLWKQGKGMEFVDYSLDDTSSPCKLMRCLQIALLCVQKYAEDRPSMLEVYLMLRNESNFIASPKQPAYSNVGNEEALKFIQRPEICSRNETTMSPVWGR	350

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci507g0002	350	FunFam	Uncharacterized protein	8	108	-	-
	Prci507g0002	350	ProSiteProfiles	Protein kinase domain profile.	33	311	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci507g0002	350	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	15	344	-	-
	Prci507g0002	350	Gene3D	Transferase(Phosphotransferase) domain 1	109	319	-	-
	Prci507g0002	350	Gene3D	Phosphorylase Kinase; domain 1	2	108	-	-
	Prci507g0002	350	ProSitePatterns	Protein kinases ATP-binding region signature.	39	61	IPR017441	GO:0005524
	Prci507g0002	350	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	109	312	-	-
	Prci507g0002	350	SMART	serkin_6	33	311	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci507g0002	350	SUPERFAMILY	Protein kinase-like (PK-like)	16	320	IPR011009	-
	Prci507g0002	350	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	154	166	IPR008271	GO:0004672\|GO:0006468
	Prci507g0002	350	Pfam	Protein kinase domain	34	242	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci507g0002	21	319	Receptor kinase-like Gene Family	AT4G11480	52.333	4.69e-112	338

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Prci507g0002		Pkinase	2.2e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci507g0002	-		-	pcin:129297403	709.523