Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3233 ATGAGAGAGAATATGAGCTGGCGGAGAGTATTGAAGTCTGTGCAAGCTCTCGCTGCCCATACCCTTCTCTTGTGTTTCACTCTTCTTCTCGTCTTCAAGCTCGATCACGTTGTCTCCTGCTCTTGGTGGGTAATATTTTTTCCACTATGGATGTTTCATGCTGTTGTTGCTCGGGGAAGGTTCTCATTACCTGCGCCATCAGTTCCACGTAATCGGCATTGGGCACCATGCCATGCCGTTGTTGCAATACCATTGCTTATTGCATTTGAATTGCTCCTTTGTATATATCTTGAGAGCTTATATGTTCATGGTTTTGCAGCTGTCAATCTGAAGATTGTGTTCCTTCCATTGTTAACATTTGAAATCATTATTCTAATTGACAATTTCAGAATGTGTAGGGCTCTAATGCCAGGGGATGAAGAAAACATGAGTGATGAGGCAATATGGGAGACACTTCCTCACTTTTGGGTTGCAATCTCAATGGTCTTCTTTGTTGCCGCTACAGTCTTCACACTCTTAAAACTGTGTGGTGATGTGGGTGCTCTTGGCTGGTGGGACTTGTTTATAAATTTTGGTATTGCCCAGTGCTTTTCCTTTCTTGTATGTACAAAGTGGTCGAATCCCATCATTCATAGAAATTCTCGCTCTAGAGAAGCCAGTGCATCTTCTAGTACGATTAGATATCTTGACTGGAATAGTGGCTTAATAGTTTCTTCAGAGGACAATCAACGTGAGGGGAGAATGTGTGGCCTACAAGACATAGGAGGTCACTTTATGAAAGTTCCAGTTATTGGATTCCAGATTCTTCTTTGTATGCGTTTAGAGGGAACACCTGCTAGTGCTAGACATATACCACTTCTAGTTCTCTTCTCTCCCCTTTTTGTACTGCAAGGTGCTGGGGTACTGTTTGCTGCATCTAAGTTGGTGGAGAAAATTATACTTCTGCTACGTAGTGGAGCTGGTGGAGGAATATATTTTATATTTTCTTCAAGAGCTCATGATTGCTTGGGGTTCTTGCATCATGGTTCAAGGTTATTGGGTTGGTGGTCCATTGATGAAGGGAGTCGAGAAGAACAAGCACGATTGTTCCAAGAGAGGACATCTGGGTATAACACTTTCAGTGGTTATCCTCCTGATGTTGTTAAGAAAATGCCTAAAAAGGATCTTGCTGAGGAGGTCTGGAGACTCCAGGCAGCTCTTGGGGAGCAAACAGAAATTACGAAATACAGTCAACAGGAGTTTGAAAGGCTTCAGAATGAGAAAGTTTTGTGCAGAATTTGTTTCGAGGGGGAGATTAACATCGTATTGCTACCTTGCAGGCACCGAATCCTCTGCAGGTATGCAATATTAGCCATTTTTGAGGGTACGTATAAGGAATGCCTAATACTTGTGATCCCAATCGAAGTATAG 1410 0.4262 MRENMSWRRVLKSVQALAAHTLLLCFTLLLVFKLDHVVSCSWWVIFFPLWMFHAVVARGRFSLPAPSVPRNRHWAPCHAVVAIPLLIAFELLLCIYLESLYVHGFAAVNLKIVFLPLLTFEIIILIDNFRMCRALMPGDEENMSDEAIWETLPHFWVAISMVFFVAATVFTLLKLCGDVGALGWWDLFINFGIAQCFSFLVCTKWSNPIIHRNSRSREASASSSTIRYLDWNSGLIVSSEDNQREGRMCGLQDIGGHFMKVPVIGFQILLCMRLEGTPASARHIPLLVLFSPLFVLQGAGVLFAASKLVEKIILLLRSGAGGGIYFIFSSRAHDCLGFLHHGSRLLGWWSIDEGSREEQARLFQERTSGYNTFSGYPPDVVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEFERLQNEKVLCRICFEGEINIVLLPCRHRILCRYAILAIFEGTYKECLILVIPIEV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3233 469 Pfam Transmembrane Fragile-X-F protein 33 296 IPR019396 -
Prci4g3233 469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 399 468 IPR013083 -
Prci4g3233 469 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 5 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3233 Prci-Chr4 43358777 43381899 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3233 5 446 C3H Transcription Factor Family AT1G73950 70.814 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3233 - - qsa:O6P43_023002 776.933