Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3220 ATGGGTAAAGAGATGGTTGAAGACTGGAAACGCAAACAGCAGGATATTGAGATGAATAACAGAAAGGTTAAAGTCCATCGCGGAGGAGGCGATTTTGATCAGTCTAAATGGAGGGATCTAAAAGTTGGAGACATAGTAAAGGTGGAGAAAGATGGTTTTTTTCCTGCTGACCTCGTATTAATTTCATCGAGTTATGATGATGCTGTTTGCTATGTTGAGACCATGAATCTTGACGGAGAAACAAATCTTAAGCTGAAACAAGCACTGGAAGAAACTTCCGTATTGCAAGAAGATTCAAGCTTTCAGAATTTCAAAGCTATGATCAAATGTGAAGATCCAAATGCAAATTTGTACTCCTTTGTGGGCACTCTGCAGCTAGAAGATCAACAGTACCCTCTTGCACCTCAGCAGCTTCTTCTTAGGGACTCAAAGCTGAGGAATACCGATTTTATTTATGGCGTGGTTATCTTTACAGGTCATGATACAAAGGTTATGCAGAATTCAACAGAACCTCCCTCTAAGAGAAGCAAACTTGAGAAACGAATGGATAAGATAATCTACTTCCTGTTCTCTGTCTTGTTCATCATTTCTCTTATTGGATCCATTTTCTTTGGAATATCAACTAGGCAAGACCTTGAAAATGGAAGAACAAAAAGATGGTACCTTAGACCAGATAATACGACAGTCTACTATGATCCAAATCAAGCTGCAGTTGCAGCAATTTTGCATTTCTTGACTGCGCTTTTGTTATATGGTTACTTGATTCCCATTTCCTTATATGTTTCGATAGAAATTGTGAAAGTTCTTCAGAGCAGATTCATTAACCAAGATGTGACCATGTATTATGAAGAAACTGACAGGCCAGCTCATGCTCGCACCTCAAATTTGAATGAAGAACTTGGCCAAGTTCGTACCATACTTTCAGATAAAACAGGAACTTTGACCTGCAATTCTATGGAATTTATCAAGTGTTCCATTGCTGGGGTTGCATATGGTCATGGAGTTACAGAAGTTGAGAGAGCTCTTGCTAGAAGAAAAGGATCTCCTTTATTTCAAAATTTGACAGATGAGGATGATCATGTTGCAGGAAAGCCATCTATCAAAGGATTTAACTTTGTAGATGAAAGAATCATGAATGGAAATTGGTTCAATGAGCCTCATGCAAATGAAATCCAGAACTTTCTGCGTTTGCTGGCAGTATGCCATACTGCAGTACCTGAAGTTGATGAAGAAACAGGTAAAGTCTCATATGAAGCAGAATCACCAGATGAGGCAGCTTTTGTGATTGCTGCAAGAGAACTAGGGTTTGAATTTTATGAAAGGACACAGGCAGAAATTTCGATACGTGAGTTTAACCTCAAATCAAAAATGAAGGAGGAAAGATCCTACAAACTCTTGAACATAATAGAATTTAGCAGTGCAAGAAAGCGGATGTCTGTAATTGTTAGGGATGAGGAGGGGAAATTGTTGCTACTTTCCAAAGGTGCTGATAGTATCATGTTCGAAAGACTTGGAAAGAATGGAAGGATGTTTGAGGAGAAGACTAAGAAGCATGTTGATGAGTATGCTGATGCTGGTCTGAGGACATTGTTACTTGCATATCGCACGCTTGATGAGGAAGAATATAATCAATTTAACATAGAATTCACGGAGGCCAAGAACTTGGTTAGTGCAGATCGGGAGCAGATTATAGAGGAAGTAGCTGAAAAGATTGAGAAGGATTTGATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTTCAAAATGGGGTCCCTGAATGCATTGATAAATTAGCACAAGCTGGAATTAAGCTATGGGTTTTGACTGGTGATAAGATGGAGACAGCAATCAATATTGGATTTGCTTGCAGTTTACTAAGACAAGGAATGAAGCAAATTATAATTAGCTCAGATACTTCAGAAATCAAATCACTGGAGAAAACGGAGGACAAGTCTGCTGCTGCAATTGCTATTAAGGCAAGTGTTCTTCGTCAGATAAAGGAAGGAATGGCATTTCTTTCTAAGTCACATGAAAACTCTGAGGCATTAGCTCTAATCATCGACGGGAAGTCTCTTGTTTACGCACTACAGCATGATGTGAAGGACATGTTTCTCGAACTTGCAGTTGACTGTGCATCTGTTATATGCTGTCGTTCGTCTCCCAAACAGAAAGCACTTGTTACAAGACTAGTAAAGAGTAAAACTGGTAGTACAACTCTTGCAATTGGTGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGCATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGTGACATCGCGATTGCCCAATTTCGGTTTCTTGAGCACCTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATATCAAAAATGATCTGCTACTTCTTTTACAAGAATATTGCCTTCGGCTTCACTCTCTTCTTCTTTGAGATGTATGCATCATTCTCAGGGCAAGCAGCCTACAACGACTGGTTCCTGACACCGTACAATGTAATCTTCACTTCACTTCCGGTGATTGCCTTGGGAGTGTTTGACCAGGATGTCTCCGCTAGATTATGTCTCAAGTTTCCACTACTATATCAAGAAGGTGTCCAAAATGTCCTGTTTAGCTGGAAAAGAATTCTTGGTTGGGTTTTCAATGGCCTGTTGACTTCTACTATCATCTTCTTCTTCTGTACCAAAGCAATGGAGCATCAAGCCTTTCGAAAGGGCGGTGAAATTGTAGGCCTAGAAATCCTGGGAGCCACCATGTACACGTGTGTTGTTTGGGTGGTAAACAGTCAAATGTCATTATCTATAAGCTACTTCACGTACGTACAGCATATATTCATATGGGGTGGCATTCTATTGTGGTACATATTCCTCTTGGCATATGGAGCCATGGATCCCACCATTTCAACCACCGCCTACATGGTCTTCATTGAAGCTCTTGCTCCTTCCCCATCTTACTGGTTCATTACTTTGCTTGTGCTTTTTTCCTGCCTTCTTCCATACTTCGCCTATTCTTCCATCCAGATGAGGTTTTTCCCTATGTACCATCAAATGATACAATGGATAAGAAATGACGGGAAGACCAGGGATCAAGAATACTGTGATATGGTGAGACAGAGATCTATACGACACACGACCGTTGGGTACACGGCTCGTTTTGAAGCATCCAAACGATTCGAAGACAAGCCTCATCAGCAGCAGCATCACTAA 3231 0.4061 MGKEMVEDWKRKQQDIEMNNRKVKVHRGGGDFDQSKWRDLKVGDIVKVEKDGFFPADLVLISSSYDDAVCYVETMNLDGETNLKLKQALEETSVLQEDSSFQNFKAMIKCEDPNANLYSFVGTLQLEDQQYPLAPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTEPPSKRSKLEKRMDKIIYFLFSVLFIISLIGSIFFGISTRQDLENGRTKRWYLRPDNTTVYYDPNQAAVAAILHFLTALLLYGYLIPISLYVSIEIVKVLQSRFINQDVTMYYEETDRPAHARTSNLNEELGQVRTILSDKTGTLTCNSMEFIKCSIAGVAYGHGVTEVERALARRKGSPLFQNLTDEDDHVAGKPSIKGFNFVDERIMNGNWFNEPHANEIQNFLRLLAVCHTAVPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTQAEISIREFNLKSKMKEERSYKLLNIIEFSSARKRMSVIVRDEEGKLLLLSKGADSIMFERLGKNGRMFEEKTKKHVDEYADAGLRTLLLAYRTLDEEEYNQFNIEFTEAKNLVSADREQIIEEVAEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTSEIKSLEKTEDKSAAAIAIKASVLRQIKEGMAFLSKSHENSEALALIIDGKSLVYALQHDVKDMFLELAVDCASVICCRSSPKQKALVTRLVKSKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLEHLLLVHGHWCYRRISKMICYFFYKNIAFGFTLFFFEMYASFSGQAAYNDWFLTPYNVIFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSWKRILGWVFNGLLTSTIIFFFCTKAMEHQAFRKGGEIVGLEILGATMYTCVVWVVNSQMSLSISYFTYVQHIFIWGGILLWYIFLLAYGAMDPTISTTAYMVFIEALAPSPSYWFITLLVLFSCLLPYFAYSSIQMRFFPMYHQMIQWIRNDGKTRDQEYCDMVRQRSIRHTTVGYTARFEASKRFEDKPHQQQHH 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3220 1076 SUPERFAMILY Calcium ATPase, transduction domain A 20 167 IPR008250 -
Prci4g3220 1076 NCBIfam phospholipid-translocating P-type ATPase 3 1027 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci4g3220 1076 PRINTS P-type cation-transporting ATPase superfamily signature 307 321 - -
Prci4g3220 1076 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Prci4g3220 1076 PRINTS P-type cation-transporting ATPase superfamily signature 742 761 - -
Prci4g3220 1076 Pfam Phospholipid-translocating P-type ATPase C-terminal 770 1020 IPR032630 -
Prci4g3220 1076 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1033 - -
Prci4g3220 1076 FunFam Phospholipid-transporting ATPase 420 578 - -
Prci4g3220 1076 CDD P-type_ATPase_APLT_Dnf-like 3 902 - -
Prci4g3220 1076 SFLD p-type atpase 289 793 IPR044492 -
Prci4g3220 1076 Gene3D - 579 782 IPR023214 -
Prci4g3220 1076 FunFam Phospholipid-transporting ATPase 1 169 - -
Prci4g3220 1076 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 377 580 IPR023299 GO:0000166
Prci4g3220 1076 Gene3D - 5 169 - -
Prci4g3220 1076 ProSitePatterns E1-E2 ATPases phosphorylation site. 309 315 IPR018303 -
Prci4g3220 1076 Gene3D - 423 578 IPR023299 GO:0000166
Prci4g3220 1076 Pfam E1-E2 ATPase 18 213 - -
Prci4g3220 1076 SUPERFAMILY HAD-like 302 797 IPR036412 -
Prci4g3220 1076 Pfam Cation transport ATPase (P-type) 400 505 - -
Prci4g3220 1076 FunFam Phospholipid-transporting ATPase 578 782 - -
Prci4g3220 1076 NCBIfam HAD-IC family P-type ATPase 714 825 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci4g3220 1076 SFLD C1.7: P-type atpase like 289 793 - -
Prci4g3220 1076 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 1020 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3220 Prci-Chr4 43191891 43198303 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3220 1 1073 Primary Pumps ATPases AT3G25610 70.632 0.0 1617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3220 K01530 - gmx:100797039 1776.53