Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3209 ATGGACAGCTCATCATCGCCAGAATGTGTCCACGAGCTTCTGACCAATAAGAGGAAGAACGGCAACAGCTCGGAAGATTCGAGAATGGGATGGAGAAGGTTCAAGAAGGAAAGCAACACAGGATCGTCCGTGTCGACCACTTTGAAGCTGTATGAGGATCCGTGGAAGATAAAGAAGACGCTGACGGAGAGCGACCTGGGAATCCTGAGCAGGCTGCTGCTGGCGGCGGGATCGGTGAAGAGGCACATTCTGCCGGTGCTGGACGGCGAGGATGCGAGAGGCGTGGAGAGCGAGGAAGGAATTCAGGTTAGGGTTTGGGACGTGGACACCAAATCCATGCACCAGCTGCTGCTGAAGCGGTGGTCGTCTTCCAAAAGCTTTGTGCTGATCGGCAAGTGGAGTCAGGACTTCGTCCGGCGGAGGGAATTGCGCAAAGGCGACGAGATTGGCTTCTACTGGGACCCTTATTCCTCCCTCTTCAACTTCTGCGTTCTTAAGCGCGCTAATCGCCCCTAG 516 0.5523 MDSSSSPECVHELLTNKRKNGNSSEDSRMGWRRFKKESNTGSSVSTTLKLYEDPWKIKKTLTESDLGILSRLLLAAGSVKRHILPVLDGEDARGVESEEGIQVRVWDVDTKSMHQLLLKRWSSSKSFVLIGKWSQDFVRRRELRKGDEIGFYWDPYSSLFNFCVLKRANRP 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3209 171 SUPERFAMILY DNA-binding pseudobarrel domain 54 165 IPR015300 -
Prci4g3209 171 MobiDBLite consensus disorder prediction 1 36 - -
Prci4g3209 171 Gene3D - 53 170 IPR015300 -
Prci4g3209 171 CDD B3_DNA 55 166 IPR003340 GO:0003677
Prci4g3209 171 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 15 167 - -
Prci4g3209 171 MobiDBLite consensus disorder prediction 12 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3209 Prci-Chr4 43087288 43088079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3209 57 151 B3 DNA Binding Superfamily AT1G25560 31.250 9.31e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3209 - - pvu:PHAVU_009G204600g 219.164