Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3161 ATGGAGTCTTGGAGATACAGTTCTGAAGAACAGGGTTTTGTGCCCAATAATACACTTCCACCTTCCAATACACCTGCGAGAAGTAAAAATTCCTTCCTGGGTTGGGGATTCAAAACTCAACCTAGTTTTTCCGGCAACGTTTTGGCCCCAGCTCAACAACATTTCGAGAGTCAAGATTGTGAGGAATTGGGATTTCCAGAAATGTTGGGGAAACAGTTGTTAAATGATCCGCTTGGCTGTATTATGAATGATCCGAATTCATTTTCTGGAGGTGAAGACTCTGCTTCAAAGCTTTCAAACTCTGTGGTTGATTCTAATGGCCGGGATTCCCTCGTTGATTTGAAGTTGGGACGAGTTGGTGATCAAAGAAATGTCATTGAATCGCCATTTCCCAAAGGTATTCCCTTTTTGTGTTCATCAGAGTCATCTACGACCCCCAGGAGAGTGAGAACTTCAGGGGTTCAGTCACAGACTGCTTACTGCCAAGTGTATGGCTGCAACAAGGATCTAAGCGCCTCTAAAGACTACCACAAGAGGCATAAAGTTTGTGAGGTTCACTCCAAGACTGCTAAAGTCATAGTGAAGGGCATAGAGCAGAGGTTTTGTCAACAATGTAGCAGGTTTCATTTGCTGGCTGAATTTGATGATGTTAAGCGCAGCTGTCGCAAACGCCTTGCAGGCCACAATGAGCGTCGTAGAAAGCCACAAATGGGTACTCACTCTGGAAAGGGAAGGAAGTTAATTCCGTCGTATAATGATAGCAGATTCCAGGGTAGCATGCTAACAAGAGCATCTTTTATCTGTCAAAAGATACTTCCTAGTGGTGTTTTGCATTCTGAGAAGTATGGCACTGATAACTGGCGGAAACCTATAAGGGTCCAAGGTGGCAGTGATTTTAGACATATCTCTGCTACTCCTATCACAAATGGGCGTTCTCAATCAAGATCTCTGCTTCCTTCATATGCTGAAAAGCAATATCAGCTCCTGAATGAAACTGGTGCTCTGCCCACTACAGGAAGCATATTCTGTGAGAACAGTAGTCAGTATCCGCTTGCTCTTGGACATAGTTATTCTGGGCCACGATCACCATACCAAGACACCATCTTAGGAAGTAATGACTTTAATGTTTTTGATACAGCATCAACCATTCAGGGATTATCGGGACTTACAGGCTCGGGTTGTGCTCTCTCTCTTCTGTCATCTCAATTCCAGAACTCATCAAGCCATTCATCAGCAATGCCCATGGGTCGCCCCAGCCACTACAGCTTGAGTCATGCCTCTGAAAAGGTCATGGGAATAAGCTCCCAGGCTTCTACAGGTGGGGTGTCAGCGTCAGGTAGTTTTCCTTCAGAAACAAATCATTTTGATGGAGGTCGTCTTGGCCCTGTGTTGATATTAGACAATAATGAAATGGTGGACATAGAAATCGCAGATGGTATTTTTCAAGGGTTAGATGCTGTGAATATGAAAGCCCGTCATGATGGCCCCACTATTAACTTGCTTCAACTGTCATCACAGCTTCACCGAGTTGATCATCAACGCCAATCCTTGCAGGAAAAAGGAAGAACGGCATGA 1575 0.4451 MESWRYSSEEQGFVPNNTLPPSNTPARSKNSFLGWGFKTQPSFSGNVLAPAQQHFESQDCEELGFPEMLGKQLLNDPLGCIMNDPNSFSGGEDSASKLSNSVVDSNGRDSLVDLKLGRVGDQRNVIESPFPKGIPFLCSSESSTTPRRVRTSGVQSQTAYCQVYGCNKDLSASKDYHKRHKVCEVHSKTAKVIVKGIEQRFCQQCSRFHLLAEFDDVKRSCRKRLAGHNERRRKPQMGTHSGKGRKLIPSYNDSRFQGSMLTRASFICQKILPSGVLHSEKYGTDNWRKPIRVQGGSDFRHISATPITNGRSQSRSLLPSYAEKQYQLLNETGALPTTGSIFCENSSQYPLALGHSYSGPRSPYQDTILGSNDFNVFDTASTIQGLSGLTGSGCALSLLSSQFQNSSSHSSAMPMGRPSHYSLSHASEKVMGISSQASTGGVSASGSFPSETNHFDGGRLGPVLILDNNEMVDIEIADGIFQGLDAVNMKARHDGPTINLLQLSSQLHRVDHQRQSLQEKGRTA 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3161 524 MobiDBLite consensus disorder prediction 225 249 - -
Prci4g3161 524 FunFam Squamosa promoter-binding-like protein 14 152 222 - -
Prci4g3161 524 SUPERFAMILY SBT domain 159 239 IPR036893 GO:0003677|GO:0005634
Prci4g3161 524 MobiDBLite consensus disorder prediction 1 27 - -
Prci4g3161 524 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 30 518 IPR044817 GO:0003677
Prci4g3161 524 ProSiteProfiles Zinc finger SBP-type profile. 158 235 IPR004333 GO:0003677
Prci4g3161 524 Coils Coil 500 520 - -
Prci4g3161 524 Gene3D - 151 222 IPR036893 GO:0003677|GO:0005634
Prci4g3161 524 Pfam SBP domain 161 234 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3161 Prci-Chr4 42838853 42844030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3161 147 278 SBP-box Gene Family AT1G69170 57.576 1.81e-44 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Prci4g3161 SBP 4.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3161 - - gmx:100777766 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g3161 4 42838853 42844030 Prci4g3161 4 42838853 42844030 ECH