Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3160 ATGGAGTCTTGGAGATACAGTTCTGAAGAACAGGGTTTTGTGCCCAATAATACACTTCCACCTTCCAATACACCTGCGAGAAGTAAAAATTCCTTCCTGGGTTGGGGATTCAAAACTCAACCTAGTTTTTCCGGCAACGTTTTGGCCCCAGCTCAACAACATTTCGAGAGTCAAGATTGTGAGGAATTGGGATTTCCAGAAATGTTGGGGAAACAGTTGTTAAATGATCCGCTTGGCTGTATTATGAATGATCCGAATTCATTTTCTGGAGGTGAAGACTCTGCTTCAAAGCTTTCAAACTCTGTGGTTGATTCTAATGGCCGGGATTCCCTCGTTGATTTGAAGTTGGGACGAGTTGGTGATCAAAGAAATGTCATTGAATCGCCATTTCCCAAAGGTATTCCCTTTTTGTGTTCATCAGAGTCATCTACGACCCCCAGGAGAGTGAGAACTTCAGGGGTTCAGTCACAGACTGCTTACTGCCAAGTGTATGGCTGCAACAAGGATCTAAGCGCCTCTAAAGACTACCACAAGAGGCATAAAGTTTGTGAGGTTCACTCCAAGACTGCTAAAGTCATAGTGAAGGGCATAGAGCAGAGGTTTTGTCAACAATGTAGCAGGTTTCATTTGCTGGCTGAATTTGATGATGTTAAGCGCAGCTGTCGCAAACGCCTTGCAGGCCACAATGAGCGTCGTAGAAAGCCACAAATGGGTACTCACTCTGGAAAGGGAAGGAAGTTAATTCCGTCGTATAATGATAGCAGATTCCAGGGTAGCATGCTAACAAGAGCATCTTTTATCTGTCAAAAGATACTTCCTAGTGGTGTTTTGCATTCTGAGAAGTATGGCACTGATAACTGGCGGAAACCTATAAGGGTCCAAGGTGGCAGTGATTTTAGACATATCTCTGCTACTCCTATCACAAATGGGCGTTCTCAATCAAGATCTCTGCTTCCTTCATATGCTGAAAAGCAATATCAGCTCCTGAATGAAACTGGTGCTCTGCCCACTACAGGAAGCATATTCTGTGAGAACAGTACATCAACCATTCAGGGATTATCGGGACTTACAGGCTCGGGTTGTGCTCTCTCTCTTCTGTCATCTCAATTCCAGAACTCATCAAGCCATTCATCAGCAATGCCCATGGGTCGCCCCAGCCACTACAGCTTGAGTCATGCCTCTGAAAAGGTCATGGGAATAAGCTCCCAGGCTTCTACAGGTGGGGTGTCAGCGTCAGGTAGTTTTCCTTCAGAAACAAATCATTTTGATGGAGGTCGTCTTGGCCCTGTGTTGATATTAGACAATAATGAAATGGTGGACATAGAAATCGCAGATGGTATTTTTCAAGGGTTAGATGCTGTGAATATGAAAGCCCGTCATGATGGCCCCACTATTAACTTGCTTCAACTGTCATCACAGCTTCACCGAGTTGATCATCAACGCCAATCCTTGCAGGTGAAGCAAGAAAATGATTCTTTTTGCTCCCTCCGGATTACTTAG 1500 0.446 MESWRYSSEEQGFVPNNTLPPSNTPARSKNSFLGWGFKTQPSFSGNVLAPAQQHFESQDCEELGFPEMLGKQLLNDPLGCIMNDPNSFSGGEDSASKLSNSVVDSNGRDSLVDLKLGRVGDQRNVIESPFPKGIPFLCSSESSTTPRRVRTSGVQSQTAYCQVYGCNKDLSASKDYHKRHKVCEVHSKTAKVIVKGIEQRFCQQCSRFHLLAEFDDVKRSCRKRLAGHNERRRKPQMGTHSGKGRKLIPSYNDSRFQGSMLTRASFICQKILPSGVLHSEKYGTDNWRKPIRVQGGSDFRHISATPITNGRSQSRSLLPSYAEKQYQLLNETGALPTTGSIFCENSTSTIQGLSGLTGSGCALSLLSSQFQNSSSHSSAMPMGRPSHYSLSHASEKVMGISSQASTGGVSASGSFPSETNHFDGGRLGPVLILDNNEMVDIEIADGIFQGLDAVNMKARHDGPTINLLQLSSQLHRVDHQRQSLQVKQENDSFCSLRIT 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3160 499 FunFam Squamosa promoter-binding-like protein 14 152 222 - -
Prci4g3160 499 MobiDBLite consensus disorder prediction 225 249 - -
Prci4g3160 499 MobiDBLite consensus disorder prediction 1 27 - -
Prci4g3160 499 ProSiteProfiles Zinc finger SBP-type profile. 158 235 IPR004333 GO:0003677
Prci4g3160 499 SUPERFAMILY SBT domain 159 239 IPR036893 GO:0003677|GO:0005634
Prci4g3160 499 Gene3D - 151 222 IPR036893 GO:0003677|GO:0005634
Prci4g3160 499 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 30 485 IPR044817 GO:0003677
Prci4g3160 499 Pfam SBP domain 161 234 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3160 Prci-Chr4 42838853 42844030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3160 147 278 SBP-box Gene Family AT1G69170 57.576 1.40e-44 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Prci4g3160 SBP 3.8e-31 No_clan