Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3159 ATGGCTGACGATACCTTGCAGAGAATCTTCTTCGCCGTCATCGAGCATACTTTCGTAATTATAGTCTTTGCCGCTTTGCTTTGGCAACTTTGCCGTTACATTTTGGACCGGCGGCGCCGCTACCGCAGCAGTTCCCCTTCCGATGACGACGACGACATTCCCTCTGGTCTTCCTCTCTTCCACAACACTCCTCTTGACCCTTCGCTTTTCAAGTTCCTTCCCAGCTTCACCTACTCCTCCTCCTCCACCACCGCCGATGCAGACGAGAGCAGTGGCTCTCCTCTGGAGTGCGCCATCTGCTTGATCGAGTTCAAGGATCACCACAGAGGGCGAGTGCTTCCAAACTGCGACCACATCTTTCACCTCTATTGCATAGATAGGTGGCTCGGATCACACTCGACTTGCCCATTGTGCCGAAGGCTCGTCGATCCGCCGAGAATCAAGTCAGAGCATGAGAATAATGAAGCGTCTGGTGGAGAAGAATGTCAGTTAGAGGACGCGTCGAATGTAAACCTTCCTCCGCCGATTAGGTGCCCGAAAAAGACGATAGAATTGGGAGGAGTAATTCTAGAGATTCCTGACGAAGACCCTCGCCGAAGGTAG 603 0.5257 MADDTLQRIFFAVIEHTFVIIVFAALLWQLCRYILDRRRRYRSSSPSDDDDDIPSGLPLFHNTPLDPSLFKFLPSFTYSSSSTTADADESSGSPLECAICLIEFKDHHRGRVLPNCDHIFHLYCIDRWLGSHSTCPLCRRLVDPPRIKSEHENNEASGGEECQLEDASNVNLPPPIRCPKKTIELGGVILEIPDEDPRRR 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3159 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 146 IPR013083 -
Prci4g3159 200 Pfam Ring finger domain 96 139 IPR001841 -
Prci4g3159 200 CDD RING-H2_EL5-like 96 139 - -
Prci4g3159 200 ProSiteProfiles Zinc finger RING-type profile. 97 139 IPR001841 -
Prci4g3159 200 SMART ring_2 97 138 IPR001841 -
Prci4g3159 200 SUPERFAMILY RING/U-box 86 145 - -
Prci4g3159 200 MobiDBLite consensus disorder prediction 149 168 - -
Prci4g3159 200 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 13 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3159 Prci-Chr4 42815597 42816315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3159 65 143 Rapid Response to Elicitors AT3G16720 55.696 1.15e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3159 - - pcin:129307892 392.119