Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3158 ATGGCGACATCAATCAGTGGATCTGTTGCCTCCGCTTTCTTACTCGCATTTCTCTTCTCTTGCTCCATATTCACCTCCACAGAAGCCTATGACCCTCTTGATCCAAGTGGAAACATAACAATCAAATGGGATGTCATAAGCTGGACTCCAGATGGCTATGTTGCTGTGGTTACAATGTACAACTTTCAACAGTATCGGCACATTCAGGCCCCTGGCTGGACCTTGGGATGGACATGGGCTAAAAAGGAAGTGATTTGGAACATGATGGGAGCCCAAACCACCGAGCAAGGTGACTGCTCAAAGTTCAAAGCGAACCCCCCGCATTGTTGCAAGAGGGATCCAACGGTGGTGGATCTACTTCCTGGAACTCCGTACAATCAGCAGATTGCAAATTGCTGCAAAGGGGGAGTAATGAACTCATGGGCTCAGGACCCAGCCACAGCAGTAAGTTCATTTCAGGTCAGTGTTGGCCTTGCTGGAACTACCAACAAAACTGTCAAGTTGCCTAGAAATTTCACCCTCAAAGCACCGGGGCCTGGATACACTTGTGGCCCTGCGAAGATTGTGAAACCAACCAAGTTTGTCACCAATGACAAAAGGAGAACCACTCAAGCATTGATGACCTGGAATGTTACCTGCACATATTCTCAATTCCTTGCTCAAAAGACCCCAAGTTGCTGTGTTTCCCTTTCATCCTTCTATAATGATACTATAGTAAACTGCCCAACCTGCACATGTGGCTGTCAAAACAAAACAGAGCCTGGAAGCTGTGTGGACCCAAATTCCCCGCACTTGGCCACAGTAGTAGCATCTTCAGGCAAAGCTAGTAATACACCTGTTGTCCAGTGCACCAGCCATATGTGTCCAATTCGAGTGCATTGGCATGTGAAAGTCAACTATAAAGAGTACTGGAGAGTGAAGATCACAGTCACGAATTTCAATTACCGGATGAACTATACACAATGGAACCTTGTTGTGCAGCACCCCAATTTTGACAATCTGACCCAGCTTTTTAGCTTTAATTACAAGCCATTAACACCTTACGAGGGTTTGAATGATACAGGCATGCTATGGGGATTACAGTTCTATAACGATTTGCTGTCATCAGCTGGAGAATTTGGGAATGTACAGTCAGAGCTGTTATTTAGAAAGGATGCATCAACCTTCACATTTGACAAAGGTTGGGCTTTTCCCCGGAGAATTTATTTCAATGGAGATAACTGCGTTATGCCTCCTCCTGATGCCTACCCATGGCTGCCAAATGCAACTTCAAAACTAGTTTTCTCCCTCCTAACTACCGCCACGTTTGCCTTTGTTTCTTTGGTACTTTTATTGGCTAATTCATAG 1347 0.4536 MATSISGSVASAFLLAFLFSCSIFTSTEAYDPLDPSGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWNMMGAQTTEQGDCSKFKANPPHCCKRDPTVVDLLPGTPYNQQIANCCKGGVMNSWAQDPATAVSSFQVSVGLAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVKPTKFVTNDKRRTTQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVNCPTCTCGCQNKTEPGSCVDPNSPHLATVVASSGKASNTPVVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNFNYRMNYTQWNLVVQHPNFDNLTQLFSFNYKPLTPYEGLNDTGMLWGLQFYNDLLSSAGEFGNVQSELLFRKDASTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNATSKLVFSLLTTATFAFVSLVLLLANS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3158 448 PANTHER PROTEIN COBRA 18 434 IPR006918 GO:0010215|GO:0016020
Prci4g3158 448 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0016020
Prci4g3158 448 PIRSF COBRA 2 448 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3158 Prci-Chr4 42810173 42813643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3158 15 447 COBRA Gene Family AT3G02210 76.092 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3158 - - gmx:100815779 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g3158 4 42810173 42813643 Prci4g3158 4 42810173 42813643 ECH