Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3153 ATGGGCTCAACAAGTGAAACAGCTCCTCTCTTAGAGCGCAAAGAAGGGGGAAAGAGCGACAGTGCCTCATTGAATGAACTGACAGACCTTGAACGTGCTGATGCAGCAGCAAATGTGGGATTTGCCAGGGTGCTGTCGCTTGCAAAGCCTGAAGCGGGGAAGCTGATATTTGCAACGCTGGCTCTTTTAATTGCATCAACATCAGATATTTTAATTCCAAAATTTGGTGGGAAGATAATTGACATTGTCTCGGGAGATACTCAAACTCCTGAAGATAAAGCTAGAGCTTTGGAAGCTGTCAAAAACACCATACTGTACATTTTTCTGATTGTTGTTGTTGGATCAGTTTCAACGGCACTTGATGATTGGCTTTTTTCCTCAGCCAGTGAAAGGGTTGTTGCTCGGCTCAGAAAAAGATTATTTAGTCACCTCATAATCCAGGAGATAGCCTTCTTTGATGTTACCCGTACTGGGGAGCTTATGAGCAGGCTATCTGAAGATACACAGATCATAAAAAATGCAGCAACTACCAATCTTTCTCATGCTCTGAGTAGCTTATCGACTGCATTTATTGGTCTTGGCTTCATGTTTTTTACGTCATGGAAGTTAACATTGTTGGCTTTAGCTGTCGTGCCTGCCACTTTTATTGCTGTACGTAAATTTGGTTGGTTCCTGCGTGAACTTTCTCAGAAAACTCAAGATGCAGCTGCAGCAGCAGCTTCCATGGCTGAGGAGTCCTTTGGTGCCATAAGGACGGTAAGATCTTTCGCCCAAGAAGAATATGAAATATCACGCTACTCTAAGAAAGTTGATGAGACACTTAAGCTTGGACTTAAACAAGCTAAAGTTGTCGGACTCTTTTCTGGAGGCATTTATACAGCAACTTCACTGCCAATTATTTTAGTAGTTATCTATGGGGCTTATTTGACCATTACAGATTCCATGTCCCCTGGTGATCTTGCGTCTTTCATTCTTTATAGTCTCACAGTGGGACATTCTATATCTGGTCTCTCAGGATTGTATACCATGGCTATGAAAGCTGTTGGTGCAAGCAGGCGGGTGTTTCAACTTCTTGATCGTGTATCATCAATGCCAATGTCAGGAAATAAATGTCCTCTGGGAGGACAAGATGGGGAGGTGGAACTAGATGATGTCTGGTTTGCATATCCATCTCGCCCTAGTCATATGGTACTTAAGGGAATTACAATGAAATTGCAGCCTGGCTCAAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGATCAGTATTGTGAGTCAGGAGCCTGTACTTTTCAACTGTTCCATAGAGGATAACATAGCTTATGGATTTGACGGCAAAGTTGATCCTGCTGATATAGAAAATGCAGCCAAAATGGCAAATGCGCATGAATTCATATCACAATTCACAGATAAATACCAGACCCATGTTGGGGAGCGTGGGGTAAGGCTTTCAGGGGGGCAGAAACAGAGAGTAGCAATTGCCAGGGCTTTGCTTATGAACCCAAAGATTCTTCTCCTCGATGAAGCCACTAGTGCCCTGGATGCTGAAAGCGAATATTTAGTACAGGATGCTATGGAATGTCTGATGAAGGGAAGGACAGTTCTGGTTATTGCTCACAGGCTATCAACTGTGAAGCGTGCTGATAAAGTCTTGGTCGTTTCTGAAGGTGAAATTGTGGAGAGTGGCACCCATGAAGACCTTCTCAGCAACAATGGCGTCTACTCTGCATTAGTCAGTAGACAGCTACAAACAATGAAACCTGAGAAATACAAAACTGAAGTGGAGACGTATTAG 1797 0.4341 MGSTSETAPLLERKEGGKSDSASLNELTDLERADAAANVGFARVLSLAKPEAGKLIFATLALLIASTSDILIPKFGGKIIDIVSGDTQTPEDKARALEAVKNTILYIFLIVVVGSVSTALDDWLFSSASERVVARLRKRLFSHLIIQEIAFFDVTRTGELMSRLSEDTQIIKNAATTNLSHALSSLSTAFIGLGFMFFTSWKLTLLALAVVPATFIAVRKFGWFLRELSQKTQDAAAAAASMAEESFGAIRTVRSFAQEEYEISRYSKKVDETLKLGLKQAKVVGLFSGGIYTATSLPIILVVIYGAYLTITDSMSPGDLASFILYSLTVGHSISGLSGLYTMAMKAVGASRRVFQLLDRVSSMPMSGNKCPLGGQDGEVELDDVWFAYPSRPSHMVLKGITMKLQPGSKVALVGPSGGGKISIVSQEPVLFNCSIEDNIAYGFDGKVDPADIENAAKMANAHEFISQFTDKYQTHVGERGVRLSGGQKQRVAIARALLMNPKILLLDEATSALDAESEYLVQDAMECLMKGRTVLVIAHRLSTVKRADKVLVVSEGEIVESGTHEDLLSNNGVYSALVSRQLQTMKPEKYKTEVETY 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3153 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 582 IPR027417 -
Prci4g3153 598 FunFam ABC transporter B family member 25 107 377 - -
Prci4g3153 598 ProSitePatterns ABC transporters family signature. 484 498 IPR017871 GO:0005524|GO:0016887
Prci4g3153 598 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 31 422 IPR039421 -
Prci4g3153 598 FunFam ABC transporter B family member 28 420 584 - -
Prci4g3153 598 MobiDBLite consensus disorder prediction 1 22 - -
Prci4g3153 598 Pfam ABC transporter transmembrane region 55 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g3153 598 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 56 346 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g3153 598 Gene3D ABC transporter type 1, transmembrane domain 39 369 IPR036640 GO:0005524|GO:0016020
Prci4g3153 598 SMART AAA_5 407 558 IPR003593 GO:0016887
Prci4g3153 598 Gene3D - 375 422 IPR027417 -
Prci4g3153 598 Gene3D - 423 591 IPR027417 -
Prci4g3153 598 SUPERFAMILY ABC transporter transmembrane region 43 359 IPR036640 GO:0005524|GO:0016020
Prci4g3153 598 PIRSF ABC_prm/ATPase_B 420 597 - -
Prci4g3153 598 PIRSF ABC_prm/ATPase_B 3 424 - -
Prci4g3153 598 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 581 IPR003439 GO:0005524
Prci4g3153 598 CDD ABC_6TM_AtABCB27_like 58 354 - -
Prci4g3153 598 Pfam ABC transporter 421 512 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3153 Prci-Chr4 42759846 42765583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3153 72 582 Calmodulin-binding Proteins AT2G36910 34.775 6.23e-82 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3153 - - qsa:O6P43_022927 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g3153 4 42759846 42765583 Prci4g3153 4 42759846 42765583 ECH