Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3152 ATGGGCTCAACAAGTGAAACAGCTCCTCTCTTAGAGCGCAAAGAAGGGGGAAAGAGCGACAGTGCCTCATTGAATGAACTGACAGACCTTGAACGTGCTGATGCAGCAGCAAATGTGGGATTTGCCAGGGTGCTGTCGCTTCCAAAATTTGGTGGGAAGATAATTGACATTGTCTCGGGAGATACTCAAACTCCTGAAGATAAAGCTAGAGCTTTGGAAGCTGTCAAAAACACCATACTGTACATTTTTCTGATTGTTGTTGTTGGATCAGTTTCAACGGCACTTGATGATTGGCTTTTTTCCTCAGCCAGTGAAAGGGTTGTTGCTCGGCTCAGAAAAAGATTATTTAGTCACCTCATAATCCAGGAGATAGCCTTCTTTGATGTTACCCGTACTGGGGAGCTTATGAGCAGGCTATCTGAAGATACACAGATCATAAAAAATGCAGCAACTACCAATCTTTCTCATGCTCTGAGTAGCTTATCGACTGCATTTATTGGTCTTGGCTTCATGTTTTTTACGTCATGGAAGTTAACATTGTTGGCTTTAGCTGTCGTGCCTGCCACTTTTATTGCTGTACGTAAATTTGGTTGGTTCCTGCGTGAACTTTCTCAGAAAACTCAAGATGCAGCTGCAGCAGCAGCTTCCATGGCTGAGGAGTCCTTTGGTGCCATAAGGACGGTAAGATCTTTCGCCCAAGAAGAATATGAAATATCACGCTACTCTAAGAAAGTTGATGAGACACTTAAGCTTGGACTTAAACAAGCTAAAGTTGTCGGACTCTTTTCTGGAGGCATTTATACAGCAACTTCACTGCCAATTATTTTAGTAGTTATCTATGGGGCTTATTTGACCATTACAGATTCCATGTCCCCTGGTGATCTTGCGTCTTTCATTCTTTATAGTCTCACAGTGGGACATTCTATATCTGGTCTCTCAGGATTGTATACCATGGCTATGAAAGCTGTTGGTGCAAGCAGGCGGGTGTTTCAACTTCTTGATCGTGTATCATCAATGCCAATGTCAGGAAATAAATGTCCTCTGGGAGGACAAGATGGGGAGGTGGAACTAGATGATGTCTGGTTTGCATATCCATCTCGCCCTAGTCATATGGTACTTAAGGGAATTACAATGAAATTGCAGCCTGGCTCAAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGCAAACTTAATTGAAAGATTTTATGACCCTAACAAGGGAAAGATCCTGCTGAATGGGGTTCCTCTGGTAGAAGTATCACATAAGCATCTGCACAAAAAGATCAGTATTGTGAGTCAGGAGCCTGTACTTTTCAACTGTTCCATAGAGGATAACATAGCTTATGGATTTGACGGCAAAGTTGATCCTGCTGATATAGAAAATGCAGCCAAAATGGCAAATGCGCATGAATTCATATCACAATTCACAGATAAATACCAGACCCATGTTGGGGAGCGTGGGGTAAGGCTTTCAGGGGGGCAGAAACAGAGAGTAGCAATTGCCAGGGCTTTGCTTATGAACCCAAAGATTCTTCTCCTCGATGAAGCCACTAGTGCCCTGGATGCTGAAAGCGAATATTTAGTACAGGATGCTATGGAATGTCTGATGAAGGGAAGGACAGTTCTGGTTATTGCTCACAGGCTATCAACTGTGAAGCGTGCTGATAAAGTCTTGGTCGTTTCTGAAGGTGAAATTGTGGAGAGTGGCACCCATGAAGACCTTCTCAGCAACAATGGCGTCTACTCTGCATTAGTCAGTAGACAGCTACAAACAATGAAACCTGAGAAATACAAAACTGAAGTGGAGACGTATTAG 1830 0.4322 MGSTSETAPLLERKEGGKSDSASLNELTDLERADAAANVGFARVLSLPKFGGKIIDIVSGDTQTPEDKARALEAVKNTILYIFLIVVVGSVSTALDDWLFSSASERVVARLRKRLFSHLIIQEIAFFDVTRTGELMSRLSEDTQIIKNAATTNLSHALSSLSTAFIGLGFMFFTSWKLTLLALAVVPATFIAVRKFGWFLRELSQKTQDAAAAAASMAEESFGAIRTVRSFAQEEYEISRYSKKVDETLKLGLKQAKVVGLFSGGIYTATSLPIILVVIYGAYLTITDSMSPGDLASFILYSLTVGHSISGLSGLYTMAMKAVGASRRVFQLLDRVSSMPMSGNKCPLGGQDGEVELDDVWFAYPSRPSHMVLKGITMKLQPGSKVALVGPSGGGKTTIANLIERFYDPNKGKILLNGVPLVEVSHKHLHKKISIVSQEPVLFNCSIEDNIAYGFDGKVDPADIENAAKMANAHEFISQFTDKYQTHVGERGVRLSGGQKQRVAIARALLMNPKILLLDEATSALDAESEYLVQDAMECLMKGRTVLVIAHRLSTVKRADKVLVVSEGEIVESGTHEDLLSNNGVYSALVSRQLQTMKPEKYKTEVETY 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3152 609 PIRSF ABC_prm/ATPase_B 33 608 - -
Prci4g3152 609 Gene3D - 353 602 IPR027417 -
Prci4g3152 609 SMART AAA_5 382 569 IPR003593 GO:0016887
Prci4g3152 609 Gene3D ABC transporter type 1, transmembrane domain 80 352 IPR036640 GO:0005524|GO:0016020
Prci4g3152 609 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 46 597 IPR039421 -
Prci4g3152 609 MobiDBLite consensus disorder prediction 1 22 - -
Prci4g3152 609 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 347 593 IPR027417 -
Prci4g3152 609 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 355 592 IPR003439 GO:0005524
Prci4g3152 609 FunFam ABC transporter B family member 25 82 352 - -
Prci4g3152 609 CDD ABC_MTABC3_MDL1_MDL2 355 593 - -
Prci4g3152 609 ProSitePatterns ABC transporters family signature. 495 509 IPR017871 GO:0005524|GO:0016887
Prci4g3152 609 CDD ABC_6TM_AtABCB27_like 36 329 - -
Prci4g3152 609 SUPERFAMILY ABC transporter transmembrane region 44 334 IPR036640 GO:0005524|GO:0016020
Prci4g3152 609 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 45 321 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g3152 609 FunFam ABC transporter B family member 25 353 595 - -
Prci4g3152 609 Pfam ABC transporter transmembrane region 47 304 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g3152 609 Pfam ABC transporter 373 523 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3152 Prci-Chr4 42759846 42765583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3152 41 593 Calmodulin-binding Proteins AT2G36910 37.790 3.28e-102 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3152 - - qsa:O6P43_022927 916.376