Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3151 ATGGGCTCAACAAGTGAAACAGCTCCTCTCTTAGAGCGCAAAGAAGGGGGAAAGAGCGACAGTGCCTCATTGAATGAACTGACAGACCTTGAACGTGCTGATGCACCAAAATTTGGTGGGAAGATAATTGACATTGTCTCGGGAGATACTCAAACTCCTGAAGATAAAGCTAGAGCTTTGGAAGCTGTCAAAAACACCATACTGTACATTTTTCTGATTGTTGTTGTTGGATCAGTTTCAACGGCACTTGATGATTGGCTTTTTTCCTCAGCCAGTGAAAGGGTTGTTGCTCGGCTCAGAAAAAGATTATTTAGTCACCTCATAATCCAGGAGATAGCCTTCTTTGATGTTACCCGTACTGGGGAGCTTATGAGCAGGCTATCTGAAGATACACAGATCATAAAAAATGCAGCAACTACCAATCTTTCTCATGCTCTGAGTAGCTTATCGACTGCATTTATTGGTCTTGGCTTCATGTTTTTTACGTCATGGAAGTTAACATTGTTGGCTTTAGCTGTCGTGCCTGCCACTTTTATTGCTGTACGTAAATTTGGTTGGTTCCTGCGTGAACTTTCTCAGAAAACTCAAGATGCAGCTGCAGCAGCAGCTTCCATGGCTGAGGAGTCCTTTGGTGCCATAAGGACGGTAAGATCTTTCGCCCAAGAAGAATATGAAATATCACGCTACTCTAAGAAAGTTGATGAGACACTTAAGCTTGGACTTAAACAAGCTAAAGTTGTCGGACTCTTTTCTGGAGGCATTTATACAGCAACTTCACTGCCAATTATTTTAGTAGTTATCTATGGGGCTTATTTGACCATTACAGATTCCATGTCCCCTGGTGATCTTGCGTCTTTCATTCTTTATAGTCTCACAGTGGGACATTCTATATCTGGTCTCTCAGGATTGTATACCATGGCTATGAAAGCTGTTGGTGCAAGCAGGCGGGTGTTTCAACTTCTTGATCGTGTATCATCAATGCCAATGTCAGGAAATAAATGTCCTCTGGGAGGACAAGATGGGGAGGTGGAACTAGATGATGTCTGGTTTGCATATCCATCTCGCCCTAGTCATATGGTACTTAAGGGAATTACAATGAAATTGCAGCCTGGCTCAAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGCAAACTTAATTGAAAGATTTTATGACCCTAACAAGGGAAAGATCCTGCTGAATGGGGTTCCTCTGGTAGAAGTATCACATAAGCATCTGCACAAAAAGATCAGTATTGTGAGTCAGGAGCCTGTACTTTTCAACTGTTCCATAGAGGATAACATAGCTTATGGATTTGACGGCAAAGTTGATCCTGCTGATATAGAAAATGCAGCCAAAATGGCAAATGCGCATGAATTCATATCACAATTCACAGATAAATACCAGACCCATGTTGGGGAGCGTGGGGTAAGGCTTTCAGGGGGGCAGAAACAGAGAGTAGCAATTGCCAGGGCTTTGCTTATGAACCCAAAGATTCTTCTCCTCGATGAAGCCACTAGTGCCCTGGATGCTGAAAGCGAATATTTAGTACAGGATGCTATGGAATGTCTGATGAAGGGAAGGACAGTTCTGGTTATTGCTCACAGGCTATCAACTGTGAAGCGTGCTGATAAAGTCTTGGTCGTTTCTGAAGGTGAAATTGTGGAGAGTGGCACCCATGAAGACCTTCTCAGCAACAATGGCGTCTACTCTGCATTAGTCAGTAGACAGCTACAAACAATGAAACCTGAGAAATACAAAACTGAAGTGGAGACGTATTAG 1794 0.4298 MGSTSETAPLLERKEGGKSDSASLNELTDLERADAPKFGGKIIDIVSGDTQTPEDKARALEAVKNTILYIFLIVVVGSVSTALDDWLFSSASERVVARLRKRLFSHLIIQEIAFFDVTRTGELMSRLSEDTQIIKNAATTNLSHALSSLSTAFIGLGFMFFTSWKLTLLALAVVPATFIAVRKFGWFLRELSQKTQDAAAAAASMAEESFGAIRTVRSFAQEEYEISRYSKKVDETLKLGLKQAKVVGLFSGGIYTATSLPIILVVIYGAYLTITDSMSPGDLASFILYSLTVGHSISGLSGLYTMAMKAVGASRRVFQLLDRVSSMPMSGNKCPLGGQDGEVELDDVWFAYPSRPSHMVLKGITMKLQPGSKVALVGPSGGGKTTIANLIERFYDPNKGKILLNGVPLVEVSHKHLHKKISIVSQEPVLFNCSIEDNIAYGFDGKVDPADIENAAKMANAHEFISQFTDKYQTHVGERGVRLSGGQKQRVAIARALLMNPKILLLDEATSALDAESEYLVQDAMECLMKGRTVLVIAHRLSTVKRADKVLVVSEGEIVESGTHEDLLSNNGVYSALVSRQLQTMKPEKYKTEVETY 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3151 597 SMART AAA_5 370 557 IPR003593 GO:0016887
Prci4g3151 597 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 343 580 IPR003439 GO:0005524
Prci4g3151 597 FunFam ABC transporter B family member 25 341 583 - -
Prci4g3151 597 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 37 585 IPR039421 -
Prci4g3151 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 581 IPR027417 -
Prci4g3151 597 Gene3D ABC transporter type 1, transmembrane domain 68 340 IPR036640 GO:0005524|GO:0016020
Prci4g3151 597 Gene3D - 341 590 IPR027417 -
Prci4g3151 597 FunFam ABC transporter B family member 25 70 340 - -
Prci4g3151 597 MobiDBLite consensus disorder prediction 11 26 - -
Prci4g3151 597 Pfam ABC transporter 361 511 IPR003439 GO:0005524
Prci4g3151 597 CDD ABC_MTABC3_MDL1_MDL2 343 581 - -
Prci4g3151 597 ProSitePatterns ABC transporters family signature. 483 497 IPR017871 GO:0005524|GO:0016887
Prci4g3151 597 MobiDBLite consensus disorder prediction 1 26 - -
Prci4g3151 597 PIRSF ABC_prm/ATPase_B 28 596 - -
Prci4g3151 597 SUPERFAMILY ABC transporter transmembrane region 36 322 IPR036640 GO:0005524|GO:0016020
Prci4g3151 597 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 36 309 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g3151 597 Pfam ABC transporter transmembrane region 38 292 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g3151 597 CDD ABC_6TM_AtABCB27_like 35 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3151 Prci-Chr4 42759846 42765583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3151 36 581 Calmodulin-binding Proteins AT2G36910 37.726 6.25e-101 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3151 - - qsa:O6P43_022927 896.345