Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3150 ATGGGCTCAACAAGTGAAACAGCTCCTCTCTTAGAGCGCAAAGAAGGGGGAAAGAGCGACAGTGCCTCATTGAATGAACTGACAGACCTTGAACGTGCTGATGCAGCAGCAAATGTGGGATTTGCCAGGGTGCTGTCGCTTGCAAAGCCTGAAGCGGGGAAGCTGATATTTGCAACGCTGGCTCTTTTAATTGCATCAACATCAGATATTTTAATTCCAAAATTTGGTGGGAAGATAATTGACATTGTCTCGGGAGATACTCAAACTCCTGAAGATAAAGCTAGAGCTTTGGAAGCTGTCAAAAACACCATACTGTACATTTTTCTGATTGTTGTTGTTGGATCAGTTTCAACGGCACTTGATGATTGGCTTTTTTCCTCAGCCAGTGAAAGGGTTGTTGCTCGGCTCAGAAAAAGATTATTTAGTCACCTCATAATCCAGGAGATAGCCTTCTTTGATGTTACCCGTACTGGGGAGCTTATGAGCAGGCTATCTGAAGATACACAGATCATAAAAAATGCAGCAACTACCAATCTTTCTCATGCTCTGAGTAGCTTATCGACTGCATTTATTGGTCTTGGCTTCATGTTTTTTACGTCATGGAAGTTAACATTGTTGGCTTTAGCTGTCGTGCCTGCCACTTTTATTGCTGTACGTAAATTTGGTTGGTTCCTGCGTGAACTTTCTCAGAAAACTCAAGATGCAGCTGCAGCAGCAGCTTCCATGGCTGAGGAGTCCTTTGGTGCCATAAGGACGGTAAGATCTTTCGCCCAAGAAGAATATGAAATATCACGCTACTCTAAGAAAGTTGATGAGACACTTAAGCTTGGACTTAAACAAGCTAAAGTTGTCGGACTCTTTTCTGGAGGCATTTATACAGCAACTTCACTGCCAATTATTTTAGTAGTTATCTATGGGGCTTATTTGACCATTACAGATTCCATGTCCCCTGGTGATCTTGCGTCTTTCATTCTTTATAGTCTCACAGTGGGACATTCTATATCTGGTCTCTCAGGATTGTATACCATGGCTATGAAAGCTGTTGGTGCAAGCAGGCGGGTGTTTCAACTTCTTGATCGTGTATCATCAATGCCAATGTCAGGAAATAAATGTCCTCTGGGAGGACAAGATGGGGAGGTGGAACTAGATGATGTCTGGTTTGCATATCCATCTCGCCCTAGTCATATGGTACTTAAGGGAATTACAATGAAATTGCAGCCTGGCTCAAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGCAAACTTAATTGAAAGATTTTATGACCCTAACAAGGGAAAGATCCTGCTGAATGGGGTTCCTCTGGTAGAAGTATCACATAAGCATCTGCACAAAAAGATCAGTATTGTGAGTCAGGAGCCTGTACTTTTCAACTGTTCCATAGAGGATAACATAGCTTATGGATTTGACGGCAAAGTTGATCCTGCTGATATAGAAAATGCAGCCAAAATGGCAAATGCGCATGAATTCATATCACAATTCACAGATAAATACCAGACCCATGTTGGGGAGCGTGGGGTAAGGCTTTCAGGGGGGCAGAAACAGAGAGTAGCAATTGCCAGGGCTTTGCTTATGAACCCAAAGATTCTTCTCCTCGATGAAGCCACTAGTGCCCTGGATGCTGAAAGCGAATATTTAGTACAGGATGCTATGGAATGTCTGATGAAGGGAAGGACAGTTCTGGTTATTGCTCACAGGCTATCAACTGTGAAGCGTGCTGATAAAGTCTTGGTCGTTTCTGAAGGTGAAATTGTGGAGAGTGGCACCCATGAAGACCTTCTCAGCAACAATGGCGTCTACTCTGCATTAGTCAGTAGACAGCTACAAACAATGAAACCTGAGAAATACAAAACTGAAGTGGAGACGTATTAG 1905 0.431 MGSTSETAPLLERKEGGKSDSASLNELTDLERADAAANVGFARVLSLAKPEAGKLIFATLALLIASTSDILIPKFGGKIIDIVSGDTQTPEDKARALEAVKNTILYIFLIVVVGSVSTALDDWLFSSASERVVARLRKRLFSHLIIQEIAFFDVTRTGELMSRLSEDTQIIKNAATTNLSHALSSLSTAFIGLGFMFFTSWKLTLLALAVVPATFIAVRKFGWFLRELSQKTQDAAAAAASMAEESFGAIRTVRSFAQEEYEISRYSKKVDETLKLGLKQAKVVGLFSGGIYTATSLPIILVVIYGAYLTITDSMSPGDLASFILYSLTVGHSISGLSGLYTMAMKAVGASRRVFQLLDRVSSMPMSGNKCPLGGQDGEVELDDVWFAYPSRPSHMVLKGITMKLQPGSKVALVGPSGGGKTTIANLIERFYDPNKGKILLNGVPLVEVSHKHLHKKISIVSQEPVLFNCSIEDNIAYGFDGKVDPADIENAAKMANAHEFISQFTDKYQTHVGERGVRLSGGQKQRVAIARALLMNPKILLLDEATSALDAESEYLVQDAMECLMKGRTVLVIAHRLSTVKRADKVLVVSEGEIVESGTHEDLLSNNGVYSALVSRQLQTMKPEKYKTEVETY 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3150 634 FunFam ABC transporter B family member 25 378 620 - -
Prci4g3150 634 FunFam ABC transporter B family member 25 107 377 - -
Prci4g3150 634 SMART AAA_5 407 594 IPR003593 GO:0016887
Prci4g3150 634 MobiDBLite consensus disorder prediction 1 22 - -
Prci4g3150 634 Pfam ABC transporter transmembrane region 55 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g3150 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 618 IPR027417 -
Prci4g3150 634 ProSitePatterns ABC transporters family signature. 520 534 IPR017871 GO:0005524|GO:0016887
Prci4g3150 634 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 56 346 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g3150 634 Gene3D - 378 627 IPR027417 -
Prci4g3150 634 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 31 622 IPR039421 -
Prci4g3150 634 PIRSF ABC_prm/ATPase_B 3 633 - -
Prci4g3150 634 Gene3D ABC transporter type 1, transmembrane domain 105 377 IPR036640 GO:0005524|GO:0016020
Prci4g3150 634 CDD ABC_6TM_AtABCB27_like 58 354 - -
Prci4g3150 634 Pfam ABC transporter 398 548 IPR003439 GO:0005524
Prci4g3150 634 CDD ABC_MTABC3_MDL1_MDL2 380 618 - -
Prci4g3150 634 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 617 IPR003439 GO:0005524
Prci4g3150 634 SUPERFAMILY ABC transporter transmembrane region 43 359 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3150 Prci-Chr4 42759846 42765592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3150 72 618 Calmodulin-binding Proteins AT2G36910 37.658 2.07e-100 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3150 - - qsa:O6P43_022927 963.755