Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3132 ATGGCCGCAGCTGCTCGTCCCCTCGTTACCGTCCAAACCCTTGAAGGCGACATGGCTGTCGATGCTTCCCCAGCCATTCCCCTCCCAGACGTCATGAAAGCTTCGATCCGTCCTGACATTGTCACCTTCGTTCACTCCAACATTTCCAGGAACAGCCGCCAACCCTACGCCGTCAGCAAGCGCGCTGGTCACCAGACCTCCGCCGAATCATGGGGTACCGGTCGTGCTGTGTCTCGTATCCCCCGTGTTCCTGGTGGTGGTACCCATCGTGCTGGCCAGGCTGCATTCGGCAACATGTGCCGTGGTGGCCGCATGTTTGCTCCGACTAAGATCTGGCGCCGCTGGCACCGGAAGGTTAATGTGACTCAGAAACGTCACGCCGTCGTTTCAGCCATTGCTGCATCGGCAGTTACATCTCTGGTTATGGCTCGCGGTCATAGGATTGAGTCAGTACCGGAAATGCCTCTGGTTGTAAGTGATTCTGCCGAGGGCGTTGAGAAGACGAAGGATGCGATCAAAGTTTTGAAGCAGATCGGCGCATTCCCTGATGCTCAAAAGGCGAAGGACAGCCACGCGATCAGGCCCGGTAAAGGTAAGATGAGAAATCGTCGCTATATCTCTCGCAAGGGTCCTCTGATTGTATATGGAACAGAAGGAGCTAAGGCAGTTAAGGCATTCAGGAACATTCCTGGTGTTGAAGTTGCGAATGTGGAGAGACTGAATCTGCTTAAGCTAGCACCTGGTGGTCATCTTGGGAGGTTCGTTATATGGACCAAATCCGCGTTTGAGAAGCTGGATTCTACATATGGATCATTCGACAAAGCATCAGAGAAGAAGAGGGGTTACGTGCTGCCAAGAGCTAAGATGGTCAATTCTGATTTGGCTAGGATTATCAACTCTGATGAGATTCAGTCGGTTGTGAGGCCGATCAGAAAGGAAGTCAAGAGGGCTCCATTGAAGAAAAACCCTCTCAAGAATCTGAATGTTATGTTGAAGCTGAATCCATATGCCAAGACGGCCAAGAGGATGGCTCTGCTGGCTGAAGCTCAGCGTGTGAAAGCTAAGCAAGAGAAGCTTAACAAGAAGAGGAAGTGCCTCCCTAAGGAGGAGGCTTCTGCGATCAAGGCCGCAGGGAAGGCTTGGTACCACACCATGATCTCTGATAGCGATTACACAGAATTTGAGAACTTCTCAAAATGGTTGGGTGTCTCGCAGTGA 1218 0.5181 MAAAARPLVTVQTLEGDMAVDASPAIPLPDVMKASIRPDIVTFVHSNISRNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRKVNVTQKRHAVVSAIAASAVTSLVMARGHRIESVPEMPLVVSDSAEGVEKTKDAIKVLKQIGAFPDAQKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSTYGSFDKASEKKRGYVLPRAKMVNSDLARIINSDEIQSVVRPIRKEVKRAPLKKNPLKNLNVMLKLNPYAKTAKRMALLAEAQRVKAKQEKLNKKRKCLPKEEASAIKAAGKAWYHTMISDSDYTEFENFSKWLGVSQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3132 405 MobiDBLite consensus disorder prediction 55 92 - -
Prci4g3132 405 Gene3D - 3 308 IPR023574 GO:0003735|GO:0005840|GO:0006412
Prci4g3132 405 PANTHER 60S RIBOSOMAL PROTEIN L4 4 398 IPR045240 -
Prci4g3132 405 Pfam 60S ribosomal protein L4 C-terminal domain 281 352 IPR025755 -
Prci4g3132 405 MobiDBLite consensus disorder prediction 55 73 - -
Prci4g3132 405 Pfam Ribosomal protein L4/L1 family 26 266 IPR002136 GO:0003735|GO:0005840|GO:0006412
Prci4g3132 405 SUPERFAMILY Ribosomal protein L4 22 267 IPR023574 GO:0003735|GO:0005840|GO:0006412
Prci4g3132 405 ProSitePatterns Ribosomal protein L1e signature. 120 146 IPR013000 -
Prci4g3132 405 FunFam 60S ribosomal protein L4 3 308 - -
Prci4g3132 405 Coils Coil 342 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3132 Prci-Chr4 42610853 42614359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3132 2 405 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 83.663 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3132 K02930 - gmx:100779764 729.939