Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3116 ATGGCGACTGTGACTGAATCCTCCCCTTGGCTTCTCGGCTTGGCTACGCTTGCATTAGCCGGCCTCGTTTATCGGCTTATTAAGATTTTCAAGGGCCCTTCTCTTCCTCTGCCGCCGGGTCCTACACCATGGCCTATAGTAGGAAACATGCCTCACCTTGGTCCTATGCCGCACCAGGCTCTGGCCACCCTGGCTCGGGTCCACGGACCTCTCATGCACCTCCGTCTCGGCGTCGTTGATATTATGGTGGCCGCCTCGGCTTCAGTCGCCGAGCAGTTCTTGAAGGTTCATGATGCCAACTTCTTGAGCCGGCCGCCCAACGCCGGAGCTAAGTATTTGATGTATAACTATCACGACCTTCTTTTTGCTCCCTACGGCCCACGGTGGCGGATGCTCCGAAAAATCACCGCCGTCCATATGTTCTCCAGCAAGGCCCTGGAGGATTGTAGACATTTCCGTCAGGAAGAGGTAAGAAGACTGGTTAGTAATCTGGCAAACATTGGGTCATCAAGTGGCGTGAAATTAGGGCAACTTGTGAACGTTTGTGTGACCAACGCTCTAGCAAGGGCGATGATAGGGCGGCGCGTGTTCAACGAAGACAGTGCCGGGAGCGACCAGAAGGCGGAGGTGTTCAAGTCAATGGTGGTGGAAATGATGGAGTTGGGCGGAGTTTTCAACATCAGCGACTTCATTCCGGCGTTGGAGTGGTTCGACCTTCAAGGAGTGCATGGCAAGATGAAGAAGCTGCACAAGAGGTTCGATGCATTCCTGACCAACATCGTCGAGGAACACAAGATTTCTGAGAGCCACCACCACAAGGACTTGCTGACTACGTTGTTGTCGCTTAAGGATGTTCAGAACGACGAGGGAACAAGACTCACCAACGTTGAGATCAAGGCCCTGCTCATGAACTTGTTTGCGGGTGGGACCGACACGACAACTAGCACAGCAGAGTGGGCCATGGCAGAGCTGATCAAGGACCCAGGAGTGCTGGCTCGAGTGCGACAAGAGTTAGACTCAACAGTGGGTCAAGACCGGCTCGTGAACGAGTCAGACCTAGCAGATCTACCGTACTTGCAGGCCTTCATAAAGGAAACATTTCGTCTCCACCCTCCAACGCCTCTTTCGCTTCCGAGAATCGCAGAAAGTGACTGTGAGATCTTGGGCTACCACATCCCCAAGGGCGCGACTCTGCTGATGAATATCTGGGCCATAGGTCGTGACCAGAAAGAGTGGTCCGACCCGCTAGCGTTCAAGCCCGAGAGGTTCCTTCCCGGTGGAGAGAAGGCTCACGTTGATATTAAGGGTTATGACTTTGAGGCCATCCCGTTCGGTGCCGGTCGTAGGATTTGTCCTGGTGTGAGCGTTGGCCTCTGCATGGTTCAACTTCTGACCGCTACCTTGGCTCATGCTTTTGACTGGGACCTCCAAGACGGTCTTAACCCCCAAAAGCTTAACATGGAAGAGGTATATGGGGTAACCCTCCAACGAAAGGTCCCTTTGTCTGTGAACCCAAGGCCCAGGCTCGCACCACACGTCTACTCCTAG 1548 0.5394 MATVTESSPWLLGLATLALAGLVYRLIKIFKGPSLPLPPGPTPWPIVGNMPHLGPMPHQALATLARVHGPLMHLRLGVVDIMVAASASVAEQFLKVHDANFLSRPPNAGAKYLMYNYHDLLFAPYGPRWRMLRKITAVHMFSSKALEDCRHFRQEEVRRLVSNLANIGSSSGVKLGQLVNVCVTNALARAMIGRRVFNEDSAGSDQKAEVFKSMVVEMMELGGVFNISDFIPALEWFDLQGVHGKMKKLHKRFDAFLTNIVEEHKISESHHHKDLLTTLLSLKDVQNDEGTRLTNVEIKALLMNLFAGGTDTTTSTAEWAMAELIKDPGVLARVRQELDSTVGQDRLVNESDLADLPYLQAFIKETFRLHPPTPLSLPRIAESDCEILGYHIPKGATLLMNIWAIGRDQKEWSDPLAFKPERFLPGGEKAHVDIKGYDFEAIPFGAGRRICPGVSVGLCMVQLLTATLAHAFDWDLQDGLNPQKLNMEEVYGVTLQRKVPLSVNPRPRLAPHVYS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3116 515 FunFam Cytochrome P-450 19 26 506 - -
Prci4g3116 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Prci4g3116 515 Pfam Cytochrome P450 38 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 Gene3D Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PANTHER CYTOCHROME P450 98A9 11 514 - -
Prci4g3116 515 SUPERFAMILY Cytochrome P450 38 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci4g3116 515 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3116 Prci-Chr4 42490632 42492863 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3116 16 514 Cytochrome P450 AT5G07990 62.648 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3116 K05280 - gmx:547475 723.391