Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3096 ATGGAAGATTCCAAGCGTGTCTGCAAGTTCTGCGGCAAAATCTTCCCGTGCGGCAGATCTTTGGGCGGTCATATGAGGTCTCACATCTCCGGCAATAATTCAGCTGAAACTGAGCATTCTCTCGCAGCGACGAAGCTCTCGCATGTCGTCGTCCAGGAGATTGGCGACGCAGCTGCTGTTACTGCCGGCTATGATCTGAGAGAGAAGAGGAAGAAGACTTGGAGAGTCGCCGATTCGAGTGACGGCACCACTCTAGCTTCAAACAAGCTGTGCAAGCGCTGTGGTAAAGGGTTTCACTCTTGGAAGGCTCTGTTTGGTCACATGAAATGTCACTCCGAGAAAGAAAGAGCTTCTGTTACTGATAACAATAGCTTGGAAGATCAAGATTCGTGGACTGTCATGGAGAGCCAATCCGACAACGAACCTCCCGGACCAAGAACAAGAACAAGATCGAAGAGAACAAGAGCGACCACCTCGTCTCTGTGCTTTTCCAATCATTCCTCTTCTGTTTCTGAAGTCGAGCAAGAAGAGGTAGCTTTGAGCTTGATGATGCTTAGCAGGGGAGTGCCTCCACGGGGATCTCGAGAAATGGAGTCTGATAAAAAACCAGAAACATCGGATCATTTTGCAAGAAGTGGGTCTAGGGAGAGCAAGACGAAGAAGCTAGATTTTCAGTCTGCAATGGAGGATTCTGAGGAAGTTGATAAAGAACAAGGGAAGAAGAACTACAAGTTATTGGGTTCAGAATTGAACTCAAATCCCTTGAAGAGTTCTCAGAGAAGATACAAGTTCGAGTGCACTTCTTGCAACAAGATCTTCCATTCTTACCAAGCTCTTGGTGGCCATAGAGCCAGCCATAAGAAGATCGCCAGAGATTGCTTTGTTCCAATAGATGAGACCAGTGAAAACACTATAAAACCAGGTTCGTCTCACTCTCACCATGAAGCAATTGCAGGTTCGGATCTTCATGAAGATGCAGAGCTTAACAAGAGCAAAGATCACGAATGCTCCATTTGCCTCAAGAGTTTTCCATCCGGGCAAACGATGGATGGCCACAAGAGATCCCATTTAGCTGAAAGTATGGATTTGATTGAGGAGCCAGTTGAGAAAATTAGGGACATGATCGATCTGAATCTTCCAGCAGAGGAAGAAGACAGCAATAATAATAGTAATTCTGAGTCTTACAGATCATCACCCTGGTGGGTGAGAGGCATCCACAACAAGCAGGAGGCTCTGGTAGGCCTAATGTCTAACTAA 1257 0.4638 MEDSKRVCKFCGKIFPCGRSLGGHMRSHISGNNSAETEHSLAATKLSHVVVQEIGDAAAVTAGYDLREKRKKTWRVADSSDGTTLASNKLCKRCGKGFHSWKALFGHMKCHSEKERASVTDNNSLEDQDSWTVMESQSDNEPPGPRTRTRSKRTRATTSSLCFSNHSSSVSEVEQEEVALSLMMLSRGVPPRGSREMESDKKPETSDHFARSGSRESKTKKLDFQSAMEDSEEVDKEQGKKNYKLLGSELNSNPLKSSQRRYKFECTSCNKIFHSYQALGGHRASHKKIARDCFVPIDETSENTIKPGSSHSHHEAIAGSDLHEDAELNKSKDHECSICLKSFPSGQTMDGHKRSHLAESMDLIEEPVEKIRDMIDLNLPAEEEDSNNNSNSESYRSSPWWVRGIHNKQEALVGLMSN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3096 418 MobiDBLite consensus disorder prediction 154 168 - -
Prci4g3096 418 SUPERFAMILY beta-beta-alpha zinc fingers 7 111 IPR036236 -
Prci4g3096 418 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Prci4g3096 418 ProSiteProfiles Zinc finger C2H2 type domain profile. 264 286 IPR013087 -
Prci4g3096 418 Gene3D Classic Zinc Finger 261 356 - -
Prci4g3096 418 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Prci4g3096 418 MobiDBLite consensus disorder prediction 113 168 - -
Prci4g3096 418 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Prci4g3096 418 Pfam C2H2-type zinc finger 7 28 - -
Prci4g3096 418 Pfam C2H2-type zinc finger 91 113 - -
Prci4g3096 418 Pfam C2H2-type zinc finger 264 288 - -
Prci4g3096 418 Pfam C2H2-type zinc finger 334 358 - -
Prci4g3096 418 ProSitePatterns Zinc finger C2H2 type domain signature. 266 286 IPR013087 -
Prci4g3096 418 SMART c2h2final6 6 28 IPR013087 -
Prci4g3096 418 SMART c2h2final6 334 356 IPR013087 -
Prci4g3096 418 SMART c2h2final6 89 111 IPR013087 -
Prci4g3096 418 SMART c2h2final6 264 286 IPR013087 -
Prci4g3096 418 MobiDBLite consensus disorder prediction 186 240 - -
Prci4g3096 418 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Prci4g3096 418 ProSiteProfiles Zinc finger C2H2 type domain profile. 334 361 IPR013087 -
Prci4g3096 418 ProSitePatterns Zinc finger C2H2 type domain signature. 336 356 IPR013087 -
Prci4g3096 418 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 401 - -
Prci4g3096 418 MobiDBLite consensus disorder prediction 123 144 - -
Prci4g3096 418 MobiDBLite consensus disorder prediction 193 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3096 Prci-Chr4 42351907 42353796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3096 330 381 C2H2 Transcription Factor Family AT1G26610 43.860 2.35e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci4g3096 zf-C2H2_6 2.5e-09 CL0361