Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3077 ATGATGTTTAGAGTTATGTTTCACACAGCATTTGTGCGTTCAAACATATTGGTGCTCAACCGTGATGAGGTTGATATTTTGTGGGATTCTAAGGATCAATTTCCCAGGGATTTTAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTAATCTAACCACAGTCAGGGCAAGCGAAGATGCAAATGAGACAGGAACTGCTTCACCCGAGGAATTCTATGAGGTGGAAGAGATATTTAGCAATGTAGTTGATGTGCAGGAAGGTAAGGTGGATTACGATTCTCTTCTAGCTCATGACAGTGCAATAGATGATCCCAACCAAAAAGAAGTATGGAAAGAGGACTTCGATCCTCCCGCTTTTCAGGAATGTACATCAGATGGTCAGAAACAGGACAGAATGACGGGTTCTGGTACTAATGCAGTAAAAGACATTGCTGTTGATGATGTGAAGTATAAACTTGACGAAGGAGTGGATTCTAATATTCATGAAGTGAAAGATATTACTGTTGATGATGGAGAAATTAAGTCTATAGTCACTACTGATGTCATTATGGAAATGAAGGACGTCAATGCAGATATGCATGGACAATTAGAAGATATGGACAACAAATATGATGAATTTGGCAACGCAACAGAGAAGAAATTAGATTCCAAGGCGGGCCAGCAGAAGCACGATGTTTCCAGACAAAAAAACGATAAAGTACCACCTGTGGTAAAAAAACAACTTTCATCTAACTCAAAGCCAGTGGGAGATACATTGGCAGCTAAGCAAAAGGTTAAGCAGCTTGAATCACAAGGTAATCAGGCAAAACAAGCAAAGCCAAATGCAGTAACTAGGTGGATTCCTCCTAACAAAGGTTCTTACACAAATTCAATGCACGTTTACTATCCACCATCAAGGTATAACAGCGCACCTGCTGCTCTTTCCAATGCTAACTCTTCTAAGGAGAAAATTATAGATGCTAAATCAAGGTCTTCCTCTGCACCTATCGTCTCTGGAACACCTGTTTCTAGTGACAAGACAAATGAATTTAAATGTCAAAAGGTGGACGTATCAAAACCTGCGGACTCTATAGAAGAAATGGAAGAAAAAAACTTGCCATCAATTAAAGAGACATGTCTTCAAACACCAAGTCGGGCCCCCCTTGGTAGCTCAACACAAGTGTTACGACCCCCTCCCCCTCCCCCTCCCCCTCCATTTCATTGTAAAAGCTCTATGGTAGATCCTTTTGAAACATCATCAGTAAGTAGACAAAACCAAGAGATGGATTCACAACTTGTAACTTCTTCATTTGCTCCTCCCCCTCCACCCTCTCCTCTTTTTACTAATGGAACAATCACATCAGGAGTTTTTGGAATGTCTAGTATGGTTGCCCCTCCTACTCCCCTTTCTCCTCCACCACCACCACCTCCACCGCCACCACCTCCAAGGTATGGATTTTCAATCTCTCCACCTCCCCCTCCTCCTCCCCCACCCCCACCATCTTCAAGGAGTGTTTCTCCATTGTTGTCTACACCCATATCACCACCCCAATCTTCACCTTCACCTATCCAATCCTTACCTTTTTTGAAAAATGCTCTACCACCCCTACCCCCACCCCCACCCCCACCACCCTTAAGTAGAACTTCTTTGTCTTCGCCATTGTCTTCTTCAAGCAAAGCGCCACCACCCCCACCTGTACCTCCTTTAGGTAGAGCTCCACCTCCCCCGCCCCCACCTCCTTTTAGTAGAGCTCCACCACCCCCACCCCCACCGCCACCCCCTTTAAGTGGTGTACCACCATCTCCACCTCCACCCCCTTCAAATAAAGCTCCGCCGCCGCCGCCGCCGCCACTACCTCCTCCTCCTCCTTTTAGTAAAGCCCCTCCACCTCCACCACCTCCTTTTGGTAGAGCTCCACCACCTCCACTTCCTCCTTCTGTGTATGGAGCCCCAACTCCACCTCCCCCTCCACCCCCACCTCCATCAAGAGGAGCACCTCCCCCACCACCTCCACCTCCATCAAGAGGGACACTGCCTCCTCCACCACCTCCTCCTCCATTAAATGGAACACCTCCACCACCCCCGCCTCCAATGTCTAGAGCCCCACCTCCTCCTCCACCACCTGGTGTTCGAGGCCCACCTCCTCCCCCTCCTCCTGAAGCACGTGCTCTTAATGCTCCTTCTCCCCCTGGACCTCTAGGGGGTACACCGCCACCTCCTCCACCCTTAGGTTCAAAAGGTTCAAATTCTGATCCAAGAGGAAGAGGGCGTGGACTTTCACGTCCTGGTGGCGTTGGTGCAGTAGCACCTCGACGATCCTCCTTAAAGCCTCTACATTGGAGCAAGGTGACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAGAGACATGGAGAACCTCAAATTTCCCCAGAATTTGACTTTTCAGAGCTAGAGAGCCTTTTCTCCGCAAATGTTCCTAAACCTGCGGGTTCAGGCGGTAAATCTGGAGATCGACGTAAATCTGCTGGGTCCAAACCTGACAAAGTTCACTTGATTGACCTAAGGAGGGCCAATAATACTGAAATTATGCTTACAAAGGTTAAGATGCCCCTTTCTGATATGATGGCTGCAGTACTAGCTATGGATGATTCGGTATTAGATGTTGACCAGGTTGAAAATCTCATCAAATTTTGTCCTACTAAAGAGGAGATGGAACTTTTGAAGGGATATGCTGGGGACAAGGAGAGTTTGGGAAAGTGCGAGCAGTATTTTTTGGAGCTGATGAAAGTTCCGCGAGTGGAGTCAAAATTAAGAGTATTTTCTTTCAAGATCCAGTTTGGTTCTCAGATTACCGAATTCAAGAAGAGTTTAAATACTGTGAACTCTGCCTGTGAAGAGGTCCGAAAATCTGTCAAACTGAAGGAGATAATGAAGAAAATTCTTTATTTGGGGAATACATTGAATCAAGGAACAGCAAGGGGATCTGCGGTGGGATTTAAGTTGGATAGTCTGTTAAAGCTCACAGACACTCGTGCTTCTAACAATAAGATGACACTGATGCATTACCTTTGCAAGGTCCTTGCTGAAAGGTCACCCGGGCTCCTTGATTTTCACCTAGACCTAGTCAGCCTGGAAGCTGCTACTAAGATACAATTAAAATCATTAGCTGAAGAGATGCAAGCAATCATCAAGGGATTAGAAAAAGTTAGGCAGGAGCTTGCTGCATCTGAAAACGATGGACCTGTATCTGAAGTTTTCCGCAAGACATCAAAAGAATTTGTTGTTGGTGCTGAGACAGAGGTGGCATCTGTATCAAATTTATATTCTGTGGCGGGTAGAAATGCGGATGCACTTGCACTTTATTTTGGTGAGGACCCTGTCCGTTGCCCATTCGAGCAAGTTACTGCAACTCTCCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAAAATTGTAAACAGGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGCATTAACTTGACAAAGAAAAGTGCAAGATAG 3525 0.4579 MMFRVMFHTAFVRSNILVLNRDEVDILWDSKDQFPRDFKAEVLFLDADAVIPNLTTVRASEDANETGTASPEEFYEVEEIFSNVVDVQEGKVDYDSLLAHDSAIDDPNQKEVWKEDFDPPAFQECTSDGQKQDRMTGSGTNAVKDIAVDDVKYKLDEGVDSNIHEVKDITVDDGEIKSIVTTDVIMEMKDVNADMHGQLEDMDNKYDEFGNATEKKLDSKAGQQKHDVSRQKNDKVPPVVKKQLSSNSKPVGDTLAAKQKVKQLESQGNQAKQAKPNAVTRWIPPNKGSYTNSMHVYYPPSRYNSAPAALSNANSSKEKIIDAKSRSSSAPIVSGTPVSSDKTNEFKCQKVDVSKPADSIEEMEEKNLPSIKETCLQTPSRAPLGSSTQVLRPPPPPPPPPFHCKSSMVDPFETSSVSRQNQEMDSQLVTSSFAPPPPPSPLFTNGTITSGVFGMSSMVAPPTPLSPPPPPPPPPPPPRYGFSISPPPPPPPPPPPSSRSVSPLLSTPISPPQSSPSPIQSLPFLKNALPPLPPPPPPPPLSRTSLSSPLSSSSKAPPPPPVPPLGRAPPPPPPPPFSRAPPPPPPPPPPLSGVPPSPPPPPSNKAPPPPPPPLPPPPPFSKAPPPPPPPFGRAPPPPLPPSVYGAPTPPPPPPPPPSRGAPPPPPPPPSRGTLPPPPPPPPLNGTPPPPPPPMSRAPPPPPPPGVRGPPPPPPPEARALNAPSPPGPLGGTPPPPPPLGSKGSNSDPRGRGRGLSRPGGVGAVAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQISPEFDFSELESLFSANVPKPAGSGGKSGDRRKSAGSKPDKVHLIDLRRANNTEIMLTKVKMPLSDMMAAVLAMDDSVLDVDQVENLIKFCPTKEEMELLKGYAGDKESLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQITEFKKSLNTVNSACEEVRKSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAERSPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVRQELAASENDGPVSEVFRKTSKEFVVGAETEVASVSNLYSVAGRNADALALYFGEDPVRCPFEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGINLTKKSAR 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3077 1174 MobiDBLite consensus disorder prediction 553 742 - -
Prci4g3077 1174 MobiDBLite consensus disorder prediction 327 343 - -
Prci4g3077 1174 MobiDBLite consensus disorder prediction 1151 1174 - -
Prci4g3077 1174 Coils Coil 1137 1166 - -
Prci4g3077 1174 ProSiteProfiles C2 tensin-type domain profile. 1 47 IPR014020 -
Prci4g3077 1174 MobiDBLite consensus disorder prediction 409 431 - -
Prci4g3077 1174 SUPERFAMILY Formin homology 2 domain (FH2 domain) 837 1164 - -
Prci4g3077 1174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 44 IPR035892 -
Prci4g3077 1174 MobiDBLite consensus disorder prediction 527 544 - -
Prci4g3077 1174 Pfam C2 domain of PTEN tumour-suppressor protein 1 44 IPR014020 -
Prci4g3077 1174 MobiDBLite consensus disorder prediction 389 405 - -
Prci4g3077 1174 FunFam Formin-like protein 760 1148 - -
Prci4g3077 1174 Coils Coil 1043 1070 - -
Prci4g3077 1174 MobiDBLite consensus disorder prediction 461 501 - -
Prci4g3077 1174 Gene3D - 1 49 - -
Prci4g3077 1174 ProSiteProfiles Formin homology-2 (FH2) domain profile. 761 1162 IPR015425 -
Prci4g3077 1174 MobiDBLite consensus disorder prediction 322 343 - -
Prci4g3077 1174 MobiDBLite consensus disorder prediction 814 838 - -
Prci4g3077 1174 Gene3D Formin, FH2 domain 763 1148 IPR042201 -
Prci4g3077 1174 SMART it6_source 389 1172 IPR015425 -
Prci4g3077 1174 Pfam Formin Homology 2 Domain 767 1136 IPR015425 -
Prci4g3077 1174 MobiDBLite consensus disorder prediction 216 254 - -
Prci4g3077 1174 MobiDBLite consensus disorder prediction 381 769 - -
Prci4g3077 1174 PANTHER FORMIN-J 676 1171 - -
Prci4g3077 1174 MobiDBLite consensus disorder prediction 216 237 - -
Prci4g3077 1174 MobiDBLite consensus disorder prediction 1151 1168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3077 Prci-Chr4 42225785 42234497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3077 1 313 FH2 protein (formin) Gene Family AT5G07740 49.843 4.89e-70 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3077 - - pcin:129307727 888.256