Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3073 ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTGGAGATCTCCGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCACAGATGTCTTGGAAGAAGATGAATACAAAGTTTATATGGGGGGGATCGTTGCTCAGCTACAGGATCACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTCAGGGAAGGGGAGAGGCGTAGTCATATTTCAGATATATTGTCTCAATATGACATGACAGTTATGGACTACCCTCGTCAATATGAGGGTTGTCCTCTTCTGCCTTTGGAAATGATCCATCACTTTCTTCGATCAAGTGAAAGTTGGTTGTCTTTGGAGGGGCAACAAAATGTTCTTTTGATGCATTGCGAAAGAGGTGGTTGGCCAGTGCTTGCATTCATGCTAGCAGGTCTTCTATTGTACCGGAAACAGTACAATGGGGAGCAAAAAACCCTTGAAATGGTCTACAAGCAAGCTCCTAAAGAACTTCTTCACCTTCTATCTCCTTTGAACCCACAACCTTCTCATTTGAGATATCTTCAATACATTTCTAGGAGAAATCTGGGTTCTGAGTGGCCTCCATCAGACACGCCCTTACATTTGGACTGTCTGATTCTTAGAGTCCTTCCATTATTCGATGGTGGAAAAGGTTGCAGGCCTGTCGTTCGTGTTTATGGTCAGGACCCTTCAAAACTTGTTAATAGAAGTTCTAAGCTACTTTTTTCTACTTCAAAGAACAAAAAACATGTTCGCCTCTACCAACAGGCAGAGTGTACGCTGGTGAAAATTGATATCCAATGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATACGGATGAAGACTTAAGTCATGAGGAGATGATGTTTAGAGTTATGTTTCACACAGCATTTGTGCGTTCAAACATATTGGTGCTCAACCGTGATGAGGTTGATATTTTGTGGGATTCTAAGGATCAATTTCCCAGGGATTTTAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTAATCTAACCACAGTCAGGGCAAGCGAAGATGCAAATGAGACAGGAACTGCTTCACCCGAGGAATTCTATGAGGTGGAAGAGATATTTAGCAATGTAGTTGATGTGCAGGAAGGTAAGGTGGATTACGATTCTCTTCTAGCTCATGACAGTGCAATAGATGATCCCAACCAAAAAGAAGTATGGAAAGAGGACTTCGATCCTCCCGCTTTTCAGGAATGTACATCAGATGGTCAGAAACAGGACAGAATGACGGGTTCTGGTACTAATGCAGTAAAAGACATTGCTGTTGATGATGTGAAGTATAAACTTGACGAAGGAGTGGATTCTAATATTCATGAAGTGAAAGATATTACTGTTGATGATGGAGAAATTAAGTCTATAGTCACTACTGATGTCATTATGGAAATGAAGGACGTCAATGCAGATATGCATGGACAATTAGAAGATATGGACAACAAATATGATGAATTTGGCAACGCAACAGAGAAGAAATTAGATTCCAAGGCGGGCCAGCAGAAGCACGATGTTTCCAGACAAAAAAACGATAAAGTACCACCTGTGGTAAAAAAACAACTTTCATCTAACTCAAAGCCAGTGGGAGATACATTGGCAGCTAAGCAAAAGGTTAAGCAGCTTGAATCACAAGGTAATCAGGCAAAACAAGCAAAGCCAAATGCAGTAACTAGGTGGATTCCTCCTAACAAAGGTTCTTACACAAATTCAATGCACGTTTACTATCCACCATCAAGGTATAACAGCGCACCTGCTGCTCTTTCCAATGCTAACTCTTCTAAGGAGAAAATTATAGATGCTAAATCAAGGTCTTCCTCTGCACCTATCGTCTCTGGAACACCTGTTTCTAGTGACAAGACAAATGAATTTAAATGTCAAAAGGTGGACGTATCAAAACCTGCGGACTCTATAGAAGAAATGGAAGAAAAAAACTTGCCATCAATTAAAGAGACATGTCTTCAAACACCAAGTCGGGCCCCCCTTGGTAGCTCAACACAAGTGTTACGACCCCCTCCCCCTCCCCCTCCCCCTCCATTTCATTGTAAAAGCTCTATGGTAGATCCTTTTGAAACATCATCAGTAAGTAGACAAAACCAAGAGATGGATTCACAACTTGTAACTTCTTCATTTGCTCCTCCCCCTCCACCCTCTCCTCTTTTTACTAATGGAACAATCACATCAGGAGTTTTTGGAATGTCTAGTATGGTTGCCCCTCCTACTCCCCTTTCTCCTCCACCACCACCACCTCCACCGCCACCACCTCCAAGGTATGGATTTTCAATCTCTCCACCTCCCCCTCCTCCTCCCCCACCCCCACCATCTTCAAGGAGTGTTTCTCCATTGTTGTCTACACCCATATCACCACCCCAATCTTCACCTTCACCTATCCAATCCTTACCTTTTTTGAAAAATGCTCTACCACCCCTACCCCCACCCCCACCCCCACCACCCTTAAGTAGAACTTCTTTGTCTTCGCCATTGTCTTCTTCAAGCAAAGCGCCACCACCCCCACCTGTACCTCCTTTAGGTAGAGCTCCACCTCCCCCGCCCCCACCTCCTTTTAGTAGAGCTCCACCACCCCCACCCCCACCGCCACCCCCTTTAAGTGGTGTACCACCATCTCCACCTCCACCCCCTTCAAATAAAGCTCCGCCGCCGCCGCCGCCGCCACTACCTCCTCCTCCTCCTTTTAGTAAAGCCCCTCCACCTCCACCACCTCCTTTTGGTAGAGCTCCACCACCTCCACTTCCTCCTTCTGTGTATGGAGCCCCAACTCCACCTCCCCCTCCACCCCCACCTCCATCAAGAGGAGCACCTCCCCCACCACCTCCACCTCCATCAAGAGGGACACTGCCTCCTCCACCACCTCCTCCTCCATTAAATGGAACACCTCCACCACCCCCGCCTCCAATGTCTAGAGCCCCACCTCCTCCTCCACCACCTGGTGTTCGAGGCCCACCTCCTCCCCCTCCTCCTGAAGCACGTGCTCTTAATGCTCCTTCTCCCCCTGGACCTCTAGGGGGTACACCGCCACCTCCTCCACCCTTAGGTTCAAAAGGTTCAAATTCTGATCCAAGAGGAAGAGGGCGTGGACTTTCACGTCCTGGTGGCGTTGGTGCAGTAGCACCTCGACGATCCTCCTTAAAGCCTCTACATTGGAGCAAGGTGACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAGAGACATGGAGAACCTCAAATTTCCCCAGAATTTGACTTTTCAGAGCTAGAGAGCCTTTTCTCCGCAAATGTTCCTAAACCTGCGGGTTCAGGCGGTAAATCTGGAGATCGACGTAAATCTGCTGGGTCCAAACCTGACAAAGTTCACTTGATTGACCTAAGGAGGGCCAATAATACTGAAATTATGCTTACAAAGGTTAAGATGCCCCTTTCTGATATGATGGCTGCAGTACTAGCTATGGATGATTCGGTATTAGATGTTGACCAGGTTGAAAATCTCATCAAATTTTGTCCTACTAAAGAGGAGATGGAACTTTTGAAGGGATATGCTGGGGACAAGGAGAGTTTGGGAAAGTGCGAGCAGTATTTTTTGGAGCTGATGAAAGTTCCGCGAGTGGAGTCAAAATTAAGAATTACCGAATTCAAGAAGAGTTTAAATACTGTGAACTCTGCCTGTGAAGAGGTCCGAAAATCTGTCAAACTGAAGGAGATAATGAAGAAAATTCTTTATTTGGGGAATACATTGAATCAAGGAACAGCAAGGGGATCTGCGGTGGGATTTAAGTTGGATAGTCTGTTAAAGCTCACAGACACTCGTGCTTCTAACAATAAGATGACACTGATGCATTACCTTTGCAAGGTCCTTGCTGAAAGGTCACCCGGGCTCCTTGATTTTCACCTAGACCTAGTCAGCCTGGAAGCTGCTACTAAGATACAATTAAAATCATTAGCTGAAGAGATGCAAGCAATCATCAAGGGATTAGAAAAAGTTAGGCAGGAGCTTGCTGCATCTGAAAACGATGGACCTGTATCTGAAGTTTTCCGCAAGACATCAAAAGAATTTGTTGTTGGTGCTGAGACAGAGGTGGCATCTGTATCAAATTTATATTCTGTGGCGGGTAGAAATGCGGATGCACTTGCACTTTATTTTGGTGAGGACCCTGTCCGTTGCCCATTCGAGCAAGTTACTGCAACTCTCCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAAAATTGTAAACAGGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGCATTAACTTGACAAAGAAAAGTGCAAGATAG 4368 0.4531 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYMGGIVAQLQDHFPDASFMVFNFREGERRSHISDILSQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEQKTLEMVYKQAPKELLHLLSPLNPQPSHLRYLQYISRRNLGSEWPPSDTPLHLDCLILRVLPLFDGGKGCRPVVRVYGQDPSKLVNRSSKLLFSTSKNKKHVRLYQQAECTLVKIDIQCRVQGDVVLECIHTDEDLSHEEMMFRVMFHTAFVRSNILVLNRDEVDILWDSKDQFPRDFKAEVLFLDADAVIPNLTTVRASEDANETGTASPEEFYEVEEIFSNVVDVQEGKVDYDSLLAHDSAIDDPNQKEVWKEDFDPPAFQECTSDGQKQDRMTGSGTNAVKDIAVDDVKYKLDEGVDSNIHEVKDITVDDGEIKSIVTTDVIMEMKDVNADMHGQLEDMDNKYDEFGNATEKKLDSKAGQQKHDVSRQKNDKVPPVVKKQLSSNSKPVGDTLAAKQKVKQLESQGNQAKQAKPNAVTRWIPPNKGSYTNSMHVYYPPSRYNSAPAALSNANSSKEKIIDAKSRSSSAPIVSGTPVSSDKTNEFKCQKVDVSKPADSIEEMEEKNLPSIKETCLQTPSRAPLGSSTQVLRPPPPPPPPPFHCKSSMVDPFETSSVSRQNQEMDSQLVTSSFAPPPPPSPLFTNGTITSGVFGMSSMVAPPTPLSPPPPPPPPPPPPRYGFSISPPPPPPPPPPPSSRSVSPLLSTPISPPQSSPSPIQSLPFLKNALPPLPPPPPPPPLSRTSLSSPLSSSSKAPPPPPVPPLGRAPPPPPPPPFSRAPPPPPPPPPPLSGVPPSPPPPPSNKAPPPPPPPLPPPPPFSKAPPPPPPPFGRAPPPPLPPSVYGAPTPPPPPPPPPSRGAPPPPPPPPSRGTLPPPPPPPPLNGTPPPPPPPMSRAPPPPPPPGVRGPPPPPPPEARALNAPSPPGPLGGTPPPPPPLGSKGSNSDPRGRGRGLSRPGGVGAVAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQISPEFDFSELESLFSANVPKPAGSGGKSGDRRKSAGSKPDKVHLIDLRRANNTEIMLTKVKMPLSDMMAAVLAMDDSVLDVDQVENLIKFCPTKEEMELLKGYAGDKESLGKCEQYFLELMKVPRVESKLRITEFKKSLNTVNSACEEVRKSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAERSPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVRQELAASENDGPVSEVFRKTSKEFVVGAETEVASVSNLYSVAGRNADALALYFGEDPVRCPFEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGINLTKKSAR 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3073 1455 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1053 1443 IPR015425 -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 681 697 - -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 508 529 - -
Prci4g3073 1455 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Prci4g3073 1455 Coils Coil 1324 1351 - -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 819 836 - -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 753 793 - -
Prci4g3073 1455 Gene3D - 205 336 - -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 1106 1130 - -
Prci4g3073 1455 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 845 1034 - -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 701 723 - -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 508 546 - -
Prci4g3073 1455 Coils Coil 1418 1447 - -
Prci4g3073 1455 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Prci4g3073 1455 SMART it6_source 681 1453 IPR015425 -
Prci4g3073 1455 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Prci4g3073 1455 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 673 1061 - -
Prci4g3073 1455 PANTHER FORMIN-J 1 788 - -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 1432 1455 - -
Prci4g3073 1455 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1129 1445 - -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 619 635 - -
Prci4g3073 1455 Gene3D Formin, FH2 domain 1055 1429 IPR042201 -
Prci4g3073 1455 SMART PTEN_C2_2 198 338 IPR014020 -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 1432 1449 - -
Prci4g3073 1455 MobiDBLite consensus disorder prediction 614 635 - -
Prci4g3073 1455 Pfam Formin Homology 2 Domain 1059 1417 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3073 Prci-Chr4 42225785 42236791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3073 1 605 FH2 protein (formin) Gene Family AT5G07740 67.594 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3073 - - pcin:129307727 1489.94