LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci4g3071	ATGGCCGGAGGGTTTACGTCGGCGGTGGTAATTCACTCTCACTCTTCCCTCCTCCTTTTTCTTCCCCTCTTCCTCCTCCTCCTCCTCCTCTTTTCCCCTTCCAATGCTACTTCCATTACTAGCCTTTTCTCGCCTCCTGTTAATTATCTCATTGATTGTGGCTCCTCTACCCAGACCCTTCTCCAAGATGGAAGAACCTTCAGGTCTGATCGCGATTCCTCTTCTCTTCTCTCCACTGACGAGGACATCCAAACTTCCGTCGACTCCATCAACCTCAACGCTTCCTCCTCTGTTCCTCCTACCTCACTCCCTTTATTCAACAGTGCCAGAATTTTTACGGATGAATCCACCTACACTTTCTATATCTCCAAGATGGGTCGACTTTGGGTTCGTCTTTACTTCTTCCCGCTTCCGCATCCTTCTTATAATCTCACCCAGGCCGTTTTCACCGTCCAAACTGATCGATTTGTTCTCTTGCATGACTTCTCTATCACCGACAATACCTCCTTTGTGTTCAAAGAGTACCTCCTTAATGTCTCTGACAGTAGATTCTCCTTAAAATTCTTACCCAAGAAGAAATCTCTCGCTTTCATCAACGGCATTGAGGTTGTCACAGCCCCTGACCCTCTTATCCTTGACACTGCTATTTCTGTTTTCCCACCGGGAAATTTTCATGGGATCTTTAATTACGCTCTTCAGGTATGTTACAGAGTTAACGTTGGAGGTCCACCCATGGCTCCAAACAGAGACCCCTTGTTAAGATCATGGGAGACTGATGCTTCCTATAATGTATTCCCACAAGGGTCACAGAATGTCTCTGTTTCGACAAAAATCATCAAATACCCACAAAATGGTGAGGTCACTCCATTGATTGCTCCGAGCTCTGTTTATTCTTCAGCTATGGTAATGAAAGATCCTAAAGTGAACCAGCCCAATTTCAACCTCTCATGGAGAATGAACGCAGACCAGAGTTTCTCCTACTTGATAAGGTTGCACTTCTGCGACATTGTAAGCCAAAACCTTAGCCAATTATACTTCAATGTTTACCTAAACGAGATGATGGGAGCTGCAAGTTTAGATCTTTCCTCTGAAACCAAAGCTCTAGCCACTGCTTTTTACCAGGACTTCGTCCTTAATTCATCCGCTATTACAAATGGGTCTATTTTGGTACAAGTGGGTCCCGCGAATCTCCAGCAAGGGATACCCAATGCGATCCTGAATGGATTCGAAGTGATAAAGATGAGCAATATGGCTAATAGCTTGGATGGATTTTTCTCTGTTGATGGGAAATACAAGGGTCCGAACGCAAACACCTTGGCTTTGAAAGTGGCTGCAGCTATTGGGTTGGGATTCTCTATGACAGCGATGTTTCTTGTTGCGGTGATCTGCTTCCGATGGCGACAGAGGCCTCATGGGTGGGAAAGTAAAGATAGCTTCTCGTCATGGCTTCTTCCGATTCAATCCACCCATCCTGGGAGCTTATGTTCTGCTTTAAGCAAAAGCAGCTCTAGAAGGTCAAGCATATTTGGTTCTCGCAAGAGCAGAAGCGGCTACTCTGGATACTTAACACCGACTGGGATCGGACGGTTCTTTCCTTTTGATGAACTCCGAAAAGCCACAAATAATTTCGTTGAAAAGGCAGTGATCGGCGTGGGAGGCTTCGGAAAAGTCTATCTTGGGACTTTAGAAGATGGGACAAAAGTTGCCATAAAACGAGGAAACCCTAGTTCAGAACAAGGCATAAACGAGTTCAGAACAGAGATAGACATGCTCTCAAAACTCCGACACCGACATTTAGTTTCCTTAATGGGTTTCTGTGACGAGAACTCAGAGATGATTCTTGTCTACGAATACATGGCCAACGGCCCTTTTCGTTCTCATCTCTACGGCTCCAACCTACCTCCATTATCGTGGAAACAGAGGCTTGAAATCTGTATAGGTTCTGCTCGTGGCCTTCACTATCTTCACACAGGTGCAGCACAGAGCATCATTCACCGAGATGTGAAAACAACTAACATTCTCTTGGACGAAAACTTGGTGGCTAAAGTTGCAGACTTTGGGTTGTCCAAGGCAAACCCAGAGAAAACCCACGTGAGTACAGCAGTGAAGGGTAGTTTTGGATACCTCGATCCTCAGTACTTTAGAAGTCAGCAATTAACTGAGAAATCCGATGTTTATTCTTTCGGGGTCGTGCTTATGGAAGTACTGTGTGCGAGGCCTGTGCTTGACCCGACACTTCCTAGGGAACAAGTGAATTTAGCGGATTGGGCGTTGCAGCAACATAGGAGAGGCATGCTTTATAAGATCATCGATCCTCGTATCGCCGACACAATTGCCTGTGGGTCGTTGAACAAGTTTGTGGAAGCTGCGGAGAAGTGTCTGGAGGATAATGGAGCGGATAGGCCTACCATGGGTGATGTGTTGTGGAATTTGGAGTATGCTTTGCAGCTTCAGGAAGCTGTTTCGAAGATCGATACTAATGAAGACACGACAGCGAATTCGATTGCGTTAGAACAAGCTAATGAGAGTGGCGAGAAAGGAGATCACTCTGGCACTCAAGCAACTGAAGAATCTGATGTGACCGATGTTGATTCTATGATGTTGTCTCAGATCGCTCACTTCGAAGGAAGGTAA	2634	0.4571	MAGGFTSAVVIHSHSSLLLFLPLFLLLLLLFSPSNATSITSLFSPPVNYLIDCGSSTQTLLQDGRTFRSDRDSSSLLSTDEDIQTSVDSINLNASSSVPPTSLPLFNSARIFTDESTYTFYISKMGRLWVRLYFFPLPHPSYNLTQAVFTVQTDRFVLLHDFSITDNTSFVFKEYLLNVSDSRFSLKFLPKKKSLAFINGIEVVTAPDPLILDTAISVFPPGNFHGIFNYALQVCYRVNVGGPPMAPNRDPLLRSWETDASYNVFPQGSQNVSVSTKIIKYPQNGEVTPLIAPSSVYSSAMVMKDPKVNQPNFNLSWRMNADQSFSYLIRLHFCDIVSQNLSQLYFNVYLNEMMGAASLDLSSETKALATAFYQDFVLNSSAITNGSILVQVGPANLQQGIPNAILNGFEVIKMSNMANSLDGFFSVDGKYKGPNANTLALKVAAAIGLGFSMTAMFLVAVICFRWRQRPHGWESKDSFSSWLLPIQSTHPGSLCSALSKSSSRRSSIFGSRKSRSGYSGYLTPTGIGRFFPFDELRKATNNFVEKAVIGVGGFGKVYLGTLEDGTKVAIKRGNPSSEQGINEFRTEIDMLSKLRHRHLVSLMGFCDENSEMILVYEYMANGPFRSHLYGSNLPPLSWKQRLEICIGSARGLHYLHTGAAQSIIHRDVKTTNILLDENLVAKVADFGLSKANPEKTHVSTAVKGSFGYLDPQYFRSQQLTEKSDVYSFGVVLMEVLCARPVLDPTLPREQVNLADWALQQHRRGMLYKIIDPRIADTIACGSLNKFVEAAEKCLEDNGADRPTMGDVLWNLEYALQLQEAVSKIDTNEDTTANSIALEQANESGEKGDHSGTQATEESDVTDVDSMMLSQIAHFEGR	877

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci4g3071	877	Gene3D	Transferase(Phosphotransferase) domain 1	619	839	-	-
	Prci4g3071	877	ProSitePatterns	Protein kinases ATP-binding region signature.	549	571	IPR017441	GO:0005524
	Prci4g3071	877	SMART	serkin_6	543	814	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci4g3071	877	FunFam	Receptor-like protein kinase FERONIA	231	416	-	-
	Prci4g3071	877	MobiDBLite	consensus disorder prediction	839	861	-	-
	Prci4g3071	877	CDD	STKc_IRAK	549	812	-	-
	Prci4g3071	877	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	663	675	IPR008271	GO:0004672\|GO:0006468
	Prci4g3071	877	Gene3D	-	46	207	-	-
	Prci4g3071	877	Gene3D	-	230	416	-	-
	Prci4g3071	877	SUPERFAMILY	Protein kinase-like (PK-like)	528	809	IPR011009	-
	Prci4g3071	877	FunFam	receptor-like protein kinase FERONIA	507	618	-	-
	Prci4g3071	877	FunFam	Putative receptor-like protein kinase	48	207	-	-
	Prci4g3071	877	ProSiteProfiles	Protein kinase domain profile.	543	814	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci4g3071	877	Gene3D	Phosphorylase Kinase; domain 1	518	618	-	-
	Prci4g3071	877	PANTHER	OS07G0166700 PROTEIN	529	818	IPR045272	GO:0004714\|GO:0006468
	Prci4g3071	877	Pfam	Protein tyrosine and serine/threonine kinase	547	806	IPR001245	GO:0004672\|GO:0006468
	Prci4g3071	877	Pfam	Malectin-like domain	51	413	IPR024788	-
	Prci4g3071	877	FunFam	Receptor-like protein kinase FERONIA	619	832	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci4g3071	Prci-Chr4	42214370	42217639	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci4g3071	40	838	Receptor kinase-like Gene Family	AT5G61350	62.176	0.0	1023

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Prci4g3071		Malectin_like	6.9e-34	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci4g3071	-		-	qsa:O6P43_022875	1128.62