Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3063 ATGGCTTCTAGATTCTGGACACAGGGCGGTAGTGACTCTGAGGAGGAGGAGAGTGACTATGATGAAGACGTCGAGAATGTAGCGGGTGAATCTACCAACCAAGCTGTTAAAAGCAGATACTTGCAGGGTAATGCCAGTGATAGTGATGATTCCGATGATCAGAAGCGTGTTGTTAGGTCAGCCAAAGACAAGAGATTTGAAGAAATGTCATCTACAATTGATCAGATGAAGAATGCTATGAAGATTAATGACTGGGTGAGCTTGCAAGAGAGCTTTGATAAAATAAACAAGCAGCTTGAGAAAGTCATGCGCATCGCTGAATCTGAGAAGGTGCCTACTCTTTACATAAAGGCACTTTTGATGTTGGAAGACTTCCTAGCACAGGCTTTGGCAAACAAGGATGCCAAAAAGAAGATGAGTAGTAGTAATGCTAAAGCATTGAACTCAATGAAGCAGAAATTGAAGAAGAATAATAAGCAATATGAGGATTTGATTACTAAATATAGAGAAAATCCTGAGAGTGAGGAGGACAAAGATGAAGAGGAGACTGAGGATGAGGATGAAAGTGAGGAGGAGGTAATTGAGGAGATTGATAACATACAGAAGTCAGATTCTGAAGATGGTAATCAAGATGATGAGAAGGCAGATGCAACTGATGCCCCTTGGGACCAAAAACTTAGCAAGAAAGACAGGCTTATTGATAGGCAGTTTATGAAAGACCCTAGTGAGATCTCATGGGACATGGTCAACAAGAAGTTCAAAGAGGTTGTGGCAGCTAGGGGCAGGAGGGGAACTGGAAGGTTTGAGCAGGTTGAGCAGCTTACCTTCTTAACAAAAGTTGCCAAAACACCGGCACAGAAGCTGGAAATATTTTTCAGTGTTGTTTCCGCTCAATTTGATGTTAATCCTGGTTTAAATGGGCATATGCCTATTAATGTGTGGAAGAAATGCGTGCAGAATATGCTGGTCATTCTTGATATTCTAGTGCAGTATCCAAACATAATTGTTGATGATACAGTGGAGCCTGATGAGAATGAAACTCAGAAGGGCACTGACTACAGTGGACCAATTCGGGTATGGGGCAACTTAGTTTCATTCCTAGAAAGAATTGATGCTGAGTTTTTCAAGAGCTTGCAATGTATTGATCCTCATACTCGTGAGTATGTTGAGAGGCTTAGGGATGAGCCCATGTTTCTGGCTCTTGCTCAGGATGTCCAGGATTATCTTGAAAGGGTTGGAGATTTCAAAGCTTCGTCAAAGGTAGCCCTTAGACGTGCTGAACTCATCTATTACAAACCACAAGAGGTTTATGATGCCATGAGGAAATTGGCTGAATTGGCAGATGACAATAATGGGGAGGTGGATGATGAGTCTAAAGGGTTTGAGGATACAAGGACTCCTACTGCATTTGTTGTTACTCCTGAGCTTGTTCCTCGAAAACCCACCTTCCCAGAGAATAGTAGGATGCTAATGGACTTATTGGTGTCCCTGATATACAAGTATGGGGATGAGCGGACAAAGGCACGTGCTATGCTTTGTGATATATATCACCATGCACTTCTGGATGAGTTCTCAACTGCCCGTGATCTGCTGCTTATGAGCCATTTGCAGGATAGTGTTCAGCATATGGACATATCGACACAGATACTTTTTAACAGGGCCATGTCACAGTTAGGTCTCTGTGCTTTTCGGGTTGGACTGATTTCTGAGGCTCATGGCTGTCTCTCTGAATTATATTCTGGTGGAAGGGTGAAGGAGCTGCTTGCACAAGGTGTCTCACAAAGTCGCTATCATGAGAAGACTCCGGAGCAGGAAAGGGTGGAAAGGAGACGCCAGATGCCATATCATATGCACATTAACCTGGATCTCCTGGAGTCAGTGCATCTTATTTGTGCTATGCTTCTGGAAGTTCCTAACATGGCAGCTAATGACCATGATGCAAAGCACAAAGTTATTAGCAAGACTTTCCGTCGCTTGCTTGAGGTTAGCGAGAAGCAAACATTTGCAGGTCCACCTGAAAATGTTAGAGATCATGTTATGGCTGCTACAAGGGCCCTTAGTAAGGGAGACTTTCATAAGAGTTATGATATCATCAAGTCGCTGGATGTCTGGAAATTTGTTAGAAATCATGAAAAGGTTCTAGAAATGCTCAAGGAAAAAATCAAGGCGGAGGCACTAAGGACTTACCTCTTTACGTTCTCTTCATCCTATGATTCTTTGAGTCTTGAGCAGCTCATGAAGATGTTTGACCTCTCTGTTCCTCACACCCATTGCATTGTTAGTAGGATGATGATAAATGAGGAGCTCCATGCAAGCTGGGATCAACCAACTGGCTGCATTATTTTCCAGGATGTGAAGCACTCCAGATTGCAGGCTTTGGCATTCCAGTTTACAGAGAAGTTATCTATTCTTGCGGAGAGTAATGAAAGAGCAATAGAGTCGAGGATAGGTGGTGGTGGATTGGATCTTTCCCTAAGGCGGCGAGATAGTCAGGACTATGCTGCCGCCACAACATCTACTGTTAGTGGTAGGTGGCAAGACTTGTCACTTACTCAGACAAGGCTAGGCAGTAGTGGACGTGTAGGATATAGTATTGGTGGGAGAAGGCCGTTAACATTGAGCCAAAATGGCTATTCAAGGGACCGAATGGGAAGAGGGGCAGGTGGAGGCTATCAGAGCACGAGATATCAAGACTCTGCCTATGGTGGTTCTGGGAGGACAACTCAGGGTTCAGCACTCAGGGGAGTCCAGGTGGATGCATCCACTCGCATGGTCAGCCTTAAAGGAGTTCGTGCCTAA 2799 0.4412 MASRFWTQGGSDSEEEESDYDEDVENVAGESTNQAVKSRYLQGNASDSDDSDDQKRVVRSAKDKRFEEMSSTIDQMKNAMKINDWVSLQESFDKINKQLEKVMRIAESEKVPTLYIKALLMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLITKYRENPESEEDKDEEETEDEDESEEEVIEEIDNIQKSDSEDGNQDDEKADATDAPWDQKLSKKDRLIDRQFMKDPSEISWDMVNKKFKEVVAARGRRGTGRFEQVEQLTFLTKVAKTPAQKLEIFFSVVSAQFDVNPGLNGHMPINVWKKCVQNMLVILDILVQYPNIIVDDTVEPDENETQKGTDYSGPIRVWGNLVSFLERIDAEFFKSLQCIDPHTREYVERLRDEPMFLALAQDVQDYLERVGDFKASSKVALRRAELIYYKPQEVYDAMRKLAELADDNNGEVDDESKGFEDTRTPTAFVVTPELVPRKPTFPENSRMLMDLLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERVERRRQMPYHMHINLDLLESVHLICAMLLEVPNMAANDHDAKHKVISKTFRRLLEVSEKQTFAGPPENVRDHVMAATRALSKGDFHKSYDIIKSLDVWKFVRNHEKVLEMLKEKIKAEALRTYLFTFSSSYDSLSLEQLMKMFDLSVPHTHCIVSRMMINEELHASWDQPTGCIIFQDVKHSRLQALAFQFTEKLSILAESNERAIESRIGGGGLDLSLRRRDSQDYAAATTSTVSGRWQDLSLTQTRLGSSGRVGYSIGGRRPLTLSQNGYSRDRMGRGAGGGYQSTRYQDSAYGGSGRTTQGSALRGVQVDASTRMVSLKGVRA 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3063 932 MobiDBLite consensus disorder prediction 46 70 - -
Prci4g3063 932 MobiDBLite consensus disorder prediction 892 912 - -
Prci4g3063 932 Coils Coil 144 171 - -
Prci4g3063 932 MobiDBLite consensus disorder prediction 175 195 - -
Prci4g3063 932 MobiDBLite consensus disorder prediction 872 912 - -
Prci4g3063 932 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 860 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Prci4g3063 932 Coils Coil 707 727 - -
Prci4g3063 932 MobiDBLite consensus disorder prediction 1 70 - -
Prci4g3063 932 Pfam PCI domain 655 783 IPR000717 -
Prci4g3063 932 MobiDBLite consensus disorder prediction 27 45 - -
Prci4g3063 932 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 927 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Prci4g3063 932 MobiDBLite consensus disorder prediction 12 26 - -
Prci4g3063 932 SUPERFAMILY "Winged helix" DNA-binding domain 713 787 IPR036390 -
Prci4g3063 932 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 45 647 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Prci4g3063 932 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 716 804 IPR000717 -
Prci4g3063 932 MobiDBLite consensus disorder prediction 196 225 - -
Prci4g3063 932 ProSiteProfiles PCI domain profile. 615 787 IPR000717 -
Prci4g3063 932 MobiDBLite consensus disorder prediction 167 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3063 Prci-Chr4 42158387 42164297 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3063 1 932 Eukaryotic Initiation Factors Gene Family AT3G56150 68.128 0.0 1214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3063 K03252 - gmx:100779751 1427.54