Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3058 ATGGAAGCTGAAGAGATTGAAAGAGTTGGAAGATTCTGTTTTGTATCGAAATTGATTTTATCCGCTATTTTTGGGGCTCTCACGGGATGTATTGCCATGGCGGGAGCCATCACAGGAGCAATAGCTGGTGCACTAGCGAGTAGAGCTTCCGAGAGCGGTTTTCTCCGTGGAGCTTCATTGGGTGCCATTGCTGGGGCTATAATATCCGTTGAGGTGTTCGAAGCTTCCCGCGCCTACTGGTGTTTAGAGCAAAATGGCTCAAGGAGCTCATCATCCATGGTTGGGGGTGCTAATACAGGGGACGGTGAGATTCCTGAGGTTCATAGCTTAATTTCCCCTAGAGGATTGTCTGGGGATTCGTTGAAGAAGTTACCACACCATGTTATTTTAAAGGACACGAAGATGGAGAATCTCTGCTGCACTATATGTTTGCAGGATATTGAAGTAGGAGAAGTTGCGAGGAGTTTACCTCGCTGTCACCATACGTTTCACTTGAACTGTGTGGACCGATGGCTTGTCAAGAATGATTCATGTCCTGTCTGCAGACAATATGTATAG 558 0.4659 MEAEEIERVGRFCFVSKLILSAIFGALTGCIAMAGAITGAIAGALASRASESGFLRGASLGAIAGAIISVEVFEASRAYWCLEQNGSRSSSSMVGGANTGDGEIPEVHSLISPRGLSGDSLKKLPHHVILKDTKMENLCCTICLQDIEVGEVARSLPRCHHTFHLNCVDRWLVKNDSCPVCRQYV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3058 185 SMART ring_2 140 181 IPR001841 -
Prci4g3058 185 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 5 92 IPR044523 -
Prci4g3058 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 185 IPR013083 -
Prci4g3058 185 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Prci4g3058 185 SUPERFAMILY RING/U-box 121 185 - -
Prci4g3058 185 Pfam Ring finger domain 140 182 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3058 Prci-Chr4 42107602 42110076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3058 15 185 C3H Transcription Factor Family AT1G74410 49.000 2.63e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3058 - - gmx:100800105 240.35