Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci4g3057 | ATGGAAGCTGAAGAGATTGAAAGAGTTGGAAGATTCTGTTTTGTATCGAAATTGATTTTATCCGCTATTTTTGGGGCTCTCACGGGATGTATTGCCATGGCGGGAGCCATCACAGGAGCAATAGCTGGTGCACTAGCGAGTAGAGCTTCCGAGAGCGGTTTTCTCCGTGGAGCTTCATTGGGTGCCATTGCTGGGGCTATAATATCCGTTGAGGTGTTCGAAGCTTCCCGCGCCTACTGGTGTTTAGAGCAAAATGGCTCAAGGAGCTCATCATCCATGGCGGATTTCATAGAGCAACTTGTTCGTGGGAGGCTTGTAGAAGAACAATTTACGCCAGCTATACTAACTGCTTACAGTTGGCAGGTTGGGGGTGCTAATACAGGGGACGGTGAGATTCCTGAGGTTCATAGCTTAATTTCCCCTAGAGGATTGTCTGGGGATTCGTTGAAGAAGTTACCACACCATGTTATTTTAAAGGACACGAAGATGGAGAATCTCTGCTGCACTATATGTTTGCAGGATATTGAAGTAGGAGAAGTTGCGAGGAGTTTACCTCGCTGTCACCATACGTTTCACTTGAACTGTGTGGACCGATGGCTTGTCAAGAATGATTCATGTCCTGTCTGCAGACAATATGTATAG | 642 | 0.4642 | MEAEEIERVGRFCFVSKLILSAIFGALTGCIAMAGAITGAIAGALASRASESGFLRGASLGAIAGAIISVEVFEASRAYWCLEQNGSRSSSSMADFIEQLVRGRLVEEQFTPAILTAYSWQVGGANTGDGEIPEVHSLISPRGLSGDSLKKLPHHVILKDTKMENLCCTICLQDIEVGEVARSLPRCHHTFHLNCVDRWLVKNDSCPVCRQYV | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci4g3057 | 213 | ProSiteProfiles | Zinc finger RING-type profile. | 168 | 210 | IPR001841 | - | |
Prci4g3057 | 213 | SUPERFAMILY | RING/U-box | 149 | 213 | - | - | |
Prci4g3057 | 213 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 5 | 212 | IPR044523 | - | |
Prci4g3057 | 213 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 134 | 213 | IPR013083 | - | |
Prci4g3057 | 213 | SMART | ring_2 | 168 | 209 | IPR001841 | - | |
Prci4g3057 | 213 | Pfam | Ring finger domain | 168 | 210 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci4g3057 | Prci-Chr4 | 42107526 | 42110076 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci4g3057 | 15 | 213 | C3H Transcription Factor Family | AT1G74410 | 56.500 | 1.24e-71 | 215 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci4g3057 | - | - | gmx:100800105 | 294.664 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Prci4g3057 | 4 | 42107526 | 42110076 | Prci4g3057 | 4 | 42107526 | 42110076 | ECH |