Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3056 ATGGAAGCTGAAGAGATTGAAAGAGTTGGAAGATTCTGTTTTGTATCGAAATTGATTTTATCCGCTATTTTTGGGGCTCTCACGGGATGTATTGCCATGGCGGGAGCCATCACAGGAGCAATAGCTGGTGCACTAGCGAGTAGAGCTTCCGAGAGCGGTTTTCTCCGTGGAGCTTCATTGGGTGCCATTGCTGGGGCTATAATATCCGTTGAGGTGTTCGAAGCTTCCCGCGCCTACTGGTGTTTAGAGCAAAATGGCTCAAGGAGCTCATCATCCATGGCGGATTTCATAGAGCAACTTGTTCGTGGGAGGCTTGTAGAAGAACAATTTACGCCAGCTATACTAACTGCTTACAGTTGGCAGGTTGGGGGTGCTAATACAGGGGACGGTGAGATTCCTGAGGTTCATAGCTTAATTTCCCCTAGAGGATTGTCTGGGGATTCGTTGAAGAAGTTACCACACCATGTTATTTTAAAGGACACGAAGATGGAGAATCTCTGCTGCACTATATGTTTGCAGGATATTGAAGTAGGAGAAGTTGCGAGGAGTTTACCTCGCTGTCACCATACGTTTCACTTGAACTGTGTGGACCGATGGCTTGTCAAGAATGATTCATGTCCTGTCTGCAGACAATATGTATAG 642 0.4642 MEAEEIERVGRFCFVSKLILSAIFGALTGCIAMAGAITGAIAGALASRASESGFLRGASLGAIAGAIISVEVFEASRAYWCLEQNGSRSSSSMADFIEQLVRGRLVEEQFTPAILTAYSWQVGGANTGDGEIPEVHSLISPRGLSGDSLKKLPHHVILKDTKMENLCCTICLQDIEVGEVARSLPRCHHTFHLNCVDRWLVKNDSCPVCRQYV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3056 213 ProSiteProfiles Zinc finger RING-type profile. 168 210 IPR001841 -
Prci4g3056 213 SUPERFAMILY RING/U-box 149 213 - -
Prci4g3056 213 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 5 212 IPR044523 -
Prci4g3056 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 213 IPR013083 -
Prci4g3056 213 SMART ring_2 168 209 IPR001841 -
Prci4g3056 213 Pfam Ring finger domain 168 210 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3056 Prci-Chr4 42101732 42110076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3056 15 213 C3H Transcription Factor Family AT1G74410 56.500 1.24e-71 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3056 - - gmx:100800105 294.664