Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3050 ATGGATTTGCCTCCTGGCTTTCGGTTTCACCCAACAGATGAAGAGCTAATCACTCATTATCTGTTCAAGAAGGTCACTCATACAAACTTCTCTGCTAGTGCCATTGGAGAAGTGGATTTGAACAGGTCTGAGCCTTGGGATTTGCCATGGAAAGCGAAAATGGGGGAGAAAGAGTGGTATTTTTTCTGCGTGAGAGACAGAAAATACCCAACTGGTTTGAGAACTAACAGGGCCACTGAAGCTGGGTACTGGAAAGCCACAGGGAAAGATAGGGAGATTTACAGAGGAAAATCGCTGGTAGGGATGAGGAAAACTCTGGTTTTCTACAAAGGAAGAGCACCAAAGGGAGAAAAAACCAACTGGGTCATGCATGAATACAGGTTAGATGGTAAATTCTCTGTCCACAACCTTCCCAAAACTGCAAAGAACGAGTGGGTTATTTGCAGGGTGTTTCGGAAGAATTCTGGTGGCAAGAAAACCCATTTGTCGGCTATAATGAGGTTTGAATCCACTGGAAATGGACTGAGTTCTTCGGTTTTACCACCTCTTGCAGATTCTTCTTGCATTGGTAAAACTGAACCCAAGATGACTGAATCATCATACGTGTCCTGCTTCTCCATTGTAATCGATGATCAAAGAAACCAAGGAGGGATCTTTAATTCCTCAGAAAACCCCCTTTTGGGGATTCCTTCAAATCCTCCAGAAATTCTGCCAGCAATCCCCCTTTCTGGATCATTCTATTCTGCTCATCCCCTTCAAGCTCCTGCAAATTTGCCAATATCAGGTCTTGCTCTCTCTGATAGGCAGGACCAGAACCTCCTTAAGGCTTTTCTTGATTTTGACTCCGAGGGACGACAGATGATCAGTGTTTCACAAGAAACAGGTCTCACCACTGATATGAATCCTGACATTCCTTCTGTGATGCCAAGTTTTGATATGGGCAGGAGGGTTTTTGAGAATCAGCGAAACCTTTCTGCTCCTGCTGCTGCACCACTGGACCGTGATAGCTTGTGGAATAACTAA 1023 0.4457 MDLPPGFRFHPTDEELITHYLFKKVTHTNFSASAIGEVDLNRSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDREIYRGKSLVGMRKTLVFYKGRAPKGEKTNWVMHEYRLDGKFSVHNLPKTAKNEWVICRVFRKNSGGKKTHLSAIMRFESTGNGLSSSVLPPLADSSCIGKTEPKMTESSYVSCFSIVIDDQRNQGGIFNSSENPLLGIPSNPPEILPAIPLSGSFYSAHPLQAPANLPISGLALSDRQDQNLLKAFLDFDSEGRQMISVSQETGLTTDMNPDIPSVMPSFDMGRRVFENQRNLSAPAAAPLDRDSLWNN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3050 340 Gene3D NAC domain 12 157 IPR036093 GO:0003677|GO:0006355
Prci4g3050 340 ProSiteProfiles NAC domain profile. 3 153 IPR003441 GO:0003677|GO:0006355
Prci4g3050 340 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 192 - -
Prci4g3050 340 Pfam No apical meristem (NAM) protein 4 128 IPR003441 GO:0003677|GO:0006355
Prci4g3050 340 FunFam NAC domain-containing protein 100-like 12 157 - -
Prci4g3050 340 SUPERFAMILY NAC domain 2 153 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3050 Prci-Chr4 42038816 42040509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3050 1 339 NAC Transcription Factor Family AT5G07680 57.059 1.68e-127 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci4g3050 NAM 6.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3050 - - qsa:O6P43_022865 473.396