Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3049 ATGGAAAACGCTTACGTGCAGTCAAACAAGGGAGAAGATCAGATGAACTTGCCTCCTGGCTTTCGGTTTTACCCGACAGATGAAGAGCTAATCACTCATTACCTGTTCAAGAAGGTCACTCAAACCAACTTCTCTGCTATAGCCATTGGAGAAGTGGATATGCACAAGTCTGATCCTTGGGATTTGCCGTGGAAAGCGAAAATGGGCGAGGAAGAGTGGTATTTTTTCTGCTTGAGAGACAGAAAATACCAGACTGGTTTGAGAAGCAACAGAGCCACTGAAAAAGGGTACTGGAAGTCCACAGGGAAAGATGGGGAGATTTACATAGGAAGATGGCTGGTGGGGATGAAGAAAACTCTGGTTTTCTACAAAGGAAGAGCACCAAAGGGAGAAAAAACCAACTGGGTCATGCATGAATACAGGTTAGATGGAAAATTGTCTGTCCACAACTCCAACGGAACTGCAAAGGAGGAGTGGGTTGTTTGCAGGGTGTTTCGGAAGACTTCAGGGGGCAAGAAGACCCACATTTCTGTTGTAAAGAGGTTGGAATGCATTGGAAATGGACTGGATTCTTCACTTTCACCACCTGTCTTTGGTTCTTCTCCTTATTACATTGGCTTAACTGAACCTCCGATGATGAGTGCTGATTCGGGACTCGTGCCCTGCTTCTCCACCCCATTTAATTATGAAAATGAGCAAGCAGGGATTCTTAATTCTCTAGGAAACCCAGAAATTCTGCCAACAATCCCTCTCCACGCCTCATTGTATTCTGCTGAACCATCCCTTCAAGTAGGTCCAGTGAATTTGTCTCTACCACTCTCTGCTTTTACTGTGCAGGAACGGTGCTTCCTTGATGCTGCTTTCATGAACCATAATGGATCGAGATTGAGAAATGGTTTTGTATCAGAGACGGAACAAATGGTGAGTGTCTCGCATGAAGCCAGTCTCACCACTGGCATGCATGAATCCGGAGATCTCTTCAGTGATATCAAGTTTTGA 999 0.4515 MENAYVQSNKGEDQMNLPPGFRFYPTDEELITHYLFKKVTQTNFSAIAIGEVDMHKSDPWDLPWKAKMGEEEWYFFCLRDRKYQTGLRSNRATEKGYWKSTGKDGEIYIGRWLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLDGKLSVHNSNGTAKEEWVVCRVFRKTSGGKKTHISVVKRLECIGNGLDSSLSPPVFGSSPYYIGLTEPPMMSADSGLVPCFSTPFNYENEQAGILNSLGNPEILPTIPLHASLYSAEPSLQVGPVNLSLPLSAFTVQERCFLDAAFMNHNGSRLRNGFVSETEQMVSVSHEASLTTGMHESGDLFSDIKF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3049 332 SUPERFAMILY NAC domain 7 167 IPR036093 GO:0003677|GO:0006355
Prci4g3049 332 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 187 - -
Prci4g3049 332 Gene3D NAC domain 26 171 IPR036093 GO:0003677|GO:0006355
Prci4g3049 332 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Prci4g3049 332 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Prci4g3049 332 FunFam NAC domain-containing protein 100-like 26 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3049 Prci-Chr4 42029598 42031152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3049 15 316 NAC Transcription Factor Family AT5G07680 53.974 5.75e-103 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci4g3049 NAM 2.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3049 - - pcin:129309030 691.419