Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3034 ATGAAGAAGGTGGTGACAAGAGTTGACGACGCAGTGGTTTGGAACATTCGATACGGAGAATGTCAGAAGAATCATGCGGCTTCCATGGGAGGGTATGCTGTGGATGGTTGCAGAGAATTCATGGCTAGCTCCGGCGAGGGCACAAGTGGGGCTCTCACTTGTGCGGCTTGTGGCTGCCACCGCAATTTCCACAGAAGACACGAGCAAGTCGAGGGTCGTCTGTGA 225 0.5378 MKKVVTRVDDAVVWNIRYGECQKNHAASMGGYAVDGCREFMASSGEGTSGALTCAACGCHRNFHRRHEQVEGRL 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3034 74 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 15 68 - -
Prci4g3034 74 Pfam ZF-HD protein dimerisation region 16 68 IPR006456 -
Prci4g3034 74 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 17 67 IPR006456 -
Prci4g3034 74 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 18 67 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3034 Prci-Chr4 41889799 41890554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3034 12 71 Zinc finger-homeobox gene family AT3G28917 75.410 1.42e-28 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci4g3034 ZF-HD_dimer 1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3034 - - pcin:129307761 161.384