Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3013 ATGGAAGGAGGTGATGATCTCCACCACCGTCACCACCATCACCACTACCGTCCCACTTTTCCATTTCAACTCCTCGAGAAGAAAGAAGATCAGGACGCTGCTTCTTGCTCCACCTCTTCCCCTTATCCTTCCTTAGCCATCTCTGCTGACCCTCACTCCTCCAATCCGAATCTGTCCAACCAGATCGTCCCCTCCTCCACCGAACCCTCCAGCAAGAAGCCCCCGCCCAAGAGAACCTCCACCAAGGACCGCCACACCAAGGTCGATGGACGTGGCCGTCGCATTAGAATGCCTGCACTCTGTGCCGCTCGGGTCTTCCAGCTCACCCGCGAGCTCGGCCACAAGTCTGACGGTGAAACCATCGAGTGGCTGCTCCAGCAGGCAGAACCTGCTGTCATCGCCGCCACCGGCACGGGAACCATCCCGGCTAACTTCACTTCGCTTAACATATCGTTGAGGAGCTCAGGATCCACTATGTCGGTCCCGTCACAGCTGAGATCGTCCTACTTTAATCCCAATTTTCCTGTCCAACAGCGCCGGAGCTTGTTCCCCGGAATTGGTCTGTCTTCCGATAATACCGCAGCGTCCACGCTTCTAAATTTTCAATCCAGTAACCTGACCACGAACCTGTTGCAAGCCAAGCAAGAGCTTCGCGACGGGGCGGGTCCGCCTTTGGCTGCTACAGCGTTGGATTTGTCACCGGAGTCACCGGAAGAAGGGATGGGAAGAAAACGGCGGTCGGCGGAGCAGGACTTGTCGTCAGCGCAGCATCAAATGGGGAGTTATTTGTTGCAGTCGAGCGCGGGGGCGATCCCTGCGAGCCATGCTCAGATTCCGGCCAACATTTGGATGGTGACGAATTCAAGCAACCAGGTCATGAGCGGTGATCCTATATGGACATTCCCGCCGGTAAGCAACAGTGGGCTGTACAGAGGAACCATGTCGAGCGCGTTGCATTTCATGAACTTCCCTACCCCTATGGCCCTATTGCCGGGTCAACAATTAGGTTCGTCGGCGATAAATAGTGGCGGTGGCGTTGTATCGGGCGGTAACATTAACGAAGGACATTTGAGTATGCTGGCAGGGCTGAGCCCGTACCGGCCGGTGATCGGGCTGTCAGAGTCTCAGGCTAGCGGGTCCCAATCACATCGCGGAGGCGACGATCGGCATGACACCACCAGCCACCACTCGTAG 1194 0.5662 MEGGDDLHHRHHHHHYRPTFPFQLLEKKEDQDAASCSTSSPYPSLAISADPHSSNPNLSNQIVPSSTEPSSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFPVQQRRSLFPGIGLSSDNTAASTLLNFQSSNLTTNLLQAKQELRDGAGPPLAATALDLSPESPEEGMGRKRRSAEQDLSSAQHQMGSYLLQSSAGAIPASHAQIPANIWMVTNSSNQVMSGDPIWTFPPVSNSGLYRGTMSSALHFMNFPTPMALLPGQQLGSSAINSGGGVVSGGNINEGHLSMLAGLSPYRPVIGLSESQASGSQSHRGGDDRHDTTSHHS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3013 397 MobiDBLite consensus disorder prediction 383 397 - -
Prci4g3013 397 MobiDBLite consensus disorder prediction 34 74 - -
Prci4g3013 397 MobiDBLite consensus disorder prediction 20 92 - -
Prci4g3013 397 MobiDBLite consensus disorder prediction 222 254 - -
Prci4g3013 397 Pfam TCP family transcription factor 79 250 IPR017887 -
Prci4g3013 397 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 33 383 IPR005333 GO:0003700
Prci4g3013 397 ProSiteProfiles TCP domain profile. 81 135 IPR017887 -
Prci4g3013 397 MobiDBLite consensus disorder prediction 375 397 - -
Prci4g3013 397 MobiDBLite consensus disorder prediction 237 251 - -
Prci4g3013 397 MobiDBLite consensus disorder prediction 75 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3013 Prci-Chr4 41749846 41752025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3013 70 391 TCP Transcription Factor Family AT3G47620 44.068 8.84e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Prci4g3013 TCP 1.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3013 - - gmx:100790785 534.643