Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3005 ATGTCCAGCCGAAGAACATCTTCGAACCTCTCAGAGAATGAGATTAATGAGGTTGTTTCAAGGTTACAGGCAGTACTGCCACGACTGAACCGAAGAACCAACTCAAGGGCATCAGTATCGAAGGTTGTGAAAGAAGCTTGCTGTCACGTGAAGAAGCTTCAGAAAGAGGTGGACGAGCTCAGTGACAGACTATCAAGGCTGATGGATTCCACGGATATCAGTGATATTGACGAACAAAGCCTTCGAAATATTCTACAACAATGA 264 0.447 MSSRRTSSNLSENEINEVVSRLQAVLPRLNRRTNSRASVSKVVKEACCHVKKLQKEVDELSDRLSRLMDSTDISDIDEQSLRNILQQ 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3005 87 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 69 IPR036638 GO:0046983
Prci4g3005 87 Coils Coil 43 70 - -
Prci4g3005 87 PANTHER DNA BINDING PROTEIN 1 87 IPR044172 -
Prci4g3005 87 Gene3D - 2 85 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3005 Prci-Chr4 41706718 41707356 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3005 1 72 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 41.772 1.47e-14 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3005 - - cam:101497180 93.5893