Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g3002 ATGATGCGGGAGAATCATCAGATCATTACACATCAATCTGGACATTATTCTCACAGAGGCCGAACCGTTTTTTCAAGAGGTTACCTTCCTCTTATGGGAAATTGCTTTCGACAGCGTCCCAAGGCTGATAATACTCTTCCCTCTCACACTTTTTCCGGTGCTACACAAGTTTCTAGTAGAAGCACCCATTCCTACGCTCATTCGAGTCCAGTGAAAGGATACAGTGATAAAGCTAAACCTCAGACACTCCCCACTCCAAGATTGGAAGGCGTCATACTATCCTCCCCACATTTGAAAGCCTTCACATTCAATGAGCTTAAGGATATTACTAGAAACTTTTGTCCTGATAATATGCTTGGAGAAGGGGGATTTGGTAAAGTCTATATGGGGTGGATTGATGAACAAACCTTTGGACCTGCAATGCCTGGGTCTGGAATGGCTGTAGCTGTAAAGAAGCTCAAGTCTAACGGCTTTCAAGGGCATAAGGAGTGGCTGTCTGAACTCATTTATCTTGGTCAACTTCATCATCCAAATCTTGTCAAACTTTTTGGATTCTGCCTCGATGGGGATAGTCGGCTTCTGGTATACGAGTACTTGCCCAAAGGCAGCTTGGAGAATCATCTATTTCGCAGGGGTGCACAACCACTTCCTTGGGAAACAAGGATCAAAGTTGCTATTGGTGCTGCTCGAGGCCTCACCTTCCTCCATGACTCTGAACAACAAGTTATCTACCGTGACTTCAAGGCTTCTAACATCCTATTAGATTCGGAATTTAATGCAAAACTCTCAGACTTCGGTTTTGCCAAAGCAGGGCCCACTGGCGATCGTACTCATGTTTCCACTCAAGTCCTCGGTACTCATGGCTATGCTGCTCCTGAATATATTCTTACAGGTTGGTTGACTGCAAGGTGCGATGTCTATGGCTTTGGGGTCGTCCTATTGGAATTACTATCAGGATGCCGTGCCATTGATTCAACAAAATCCGGAGTTGAACAGAATCTGGTCGATTGGGCAAGACCTTATTTGGGTGATAGGAGGAAGCTATTCCGGATCATGGACACCAAGTTAGAAGGGCAGTATCCACAGAGGGCAGCTTATAAAGCTGCAATTCTTGCTCTACAGTGCATCAGTGAGGCCAAAATCAGACCCCAGATGTCTGAAGTTCTGGCTGCTCTAGAACAGCTTCCACTTGCCAGAACTTCAGCCGGTTCCTCATCTAGATCCAGAGCAGAGAGGAGTCCCTCCTTAAGCCCCGTGGTAGAGCGAGGTCATACAGACACATCCTCTTTGGGACATAATCATCAATCAACAGAGAGAAGGTCTATCTCCAGTCACTTGACTGAGAGCACTGTAAGATCCCCTGTCAAATCTCCCATAGTACCGCGTAACAAGAGTGGATATCCTCTTCATGTGGATATCACAACGTAG 1428 0.4601 MMRENHQIITHQSGHYSHRGRTVFSRGYLPLMGNCFRQRPKADNTLPSHTFSGATQVSSRSTHSYAHSSPVKGYSDKAKPQTLPTPRLEGVILSSPHLKAFTFNELKDITRNFCPDNMLGEGGFGKVYMGWIDEQTFGPAMPGSGMAVAVKKLKSNGFQGHKEWLSELIYLGQLHHPNLVKLFGFCLDGDSRLLVYEYLPKGSLENHLFRRGAQPLPWETRIKVAIGAARGLTFLHDSEQQVIYRDFKASNILLDSEFNAKLSDFGFAKAGPTGDRTHVSTQVLGTHGYAAPEYILTGWLTARCDVYGFGVVLLELLSGCRAIDSTKSGVEQNLVDWARPYLGDRRKLFRIMDTKLEGQYPQRAAYKAAILALQCISEAKIRPQMSEVLAALEQLPLARTSAGSSSRSRAERSPSLSPVVERGHTDTSSLGHNHQSTERRSISSHLTESTVRSPVKSPIVPRNKSGYPLHVDITT 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g3002 475 MobiDBLite consensus disorder prediction 42 69 - -
Prci4g3002 475 SUPERFAMILY Protein kinase-like (PK-like) 87 392 IPR011009 -
Prci4g3002 475 MobiDBLite consensus disorder prediction 400 475 - -
Prci4g3002 475 ProSiteProfiles Protein kinase domain profile. 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g3002 475 FunFam Serine/threonine-protein kinase PBS1 199 411 - -
Prci4g3002 475 Pfam Protein tyrosine and serine/threonine kinase 117 387 IPR001245 GO:0004672|GO:0006468
Prci4g3002 475 FunFam Serine/threonine-protein kinase BIK1 81 198 - -
Prci4g3002 475 ProSitePatterns Protein kinases ATP-binding region signature. 119 152 IPR017441 GO:0005524
Prci4g3002 475 Gene3D Phosphorylase Kinase; domain 1 87 198 - -
Prci4g3002 475 MobiDBLite consensus disorder prediction 420 456 - -
Prci4g3002 475 PANTHER OS01G0588500 PROTEIN-RELATED 68 395 - -
Prci4g3002 475 CDD STKc_IRAK 119 395 - -
Prci4g3002 475 MobiDBLite consensus disorder prediction 42 81 - -
Prci4g3002 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Prci4g3002 475 Gene3D Transferase(Phosphotransferase) domain 1 199 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g3002 Prci-Chr4 41667155 41670948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g3002 44 392 Glycoside Hydrolase AT3G07070 46.260 1.81e-104 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci4g3002 PK_Tyr_Ser-Thr 1.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g3002 - - qsa:O6P43_022821 592.038