Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2998 ATGGCAGATTCGCCCAGGGGCTCTTCCAGCTTCTGGACTCAGGCTAATGCTCTGCTTCGCAAAAATTTGACTTTCCAGAAACGAAATGTAAAGACAAATGTGCGGCTCATCTTATTCCCATTTTTCGTCTGTGTGGTGCTTGTTGTTATCCAAGTAGTAATCGATAAAGAATTGGATAAGCCAAAAAATAAGTGTGGTTGCATTTGTACTAAGAGAGATGGGAATCAATGTCTGGAGGAAGCCTGTGGAGTTGAGTACTCAGACACAGATCAAGTTGCAACTTGTGCAATTCCTAATCCTCCAGAATGGCCTCCATTGTTACAAGTGCCTGCTCCCCAATATCGAGCCGTACAAGCCGATATTATTCCATTCTCAGATTTGCCAAATGATTCTTGCAGGAGGACAGGGTCATGTCCTGTAACTTTTCTCTTCACTGGCAGTAATCAGTCTTTTGGAGAAACTTTGTTTGGAAATATGTTTAAAAGTCCCTTTAGTGTGAATACCTCTGATATCGTGGATAGTTTGGCAAGAAATGTCCTGGGATCAGAATCAATGCCACAAAACCAAAATTTTCTTGAACCAGCTTTCTTTTCGGGTCTTCCCATTTACTATCTGCAAACTCAGTGCATACAGAACTCTACATTCTCTGTTCCAATCCAGATATCAACCAATACCATCCAGCAAGAGATTAGATGTGCTCAAGGTATACACTTATGGCGAAATAATTCTTCTGAGGTGAACAATGAGCTATTTAAAGGTTATCGAAAAGGGAACCCTGAGAGACAGATCAATGAGATAGCTGCAGCCTTTGATTTTCTAAATTCAAGTGTGAATAGCTTCAATGTCATCACATGGTACAACTCAACCTATAAGAATGACACCGGTTTCGGGCCAATTGCATTGGCACGAATTCCCCGTTTAGTAAATTTGGTATCAAATGCCTTCCTTCAGTTTCTACAGGGTCCAGGTACTGAGATGTTATTTGAGTTTGTAAAGGAAATGCCAAAACCTGAGACTCCCTTGAGAATTGACGTAGCTTCTCTTCTGGGCTCCCTCTTCTTTACTTGGGTCTTCCTGCAACTTTTCCCTGTATTTTTGACATCACTAGTATATGAGAAGGAAAAGAAACTCAGAATAATGATGAAGATGCATGGTCTTGGTGATGGGCCATATTGGATGATATCTTATGGCTATTTTTTTTCCCTATCAGTGCTCTATGTGCTATGCTTTGTGATATTTGGCTCACTCATAGGGTTAAAATTCTTTACATTGAATGACTACAGCATCCAATTGGTTTTTTATTTCATCTTTATAAACTTGCAAATTTCACTGGCATTTCTTGTGGCCGCCACGTTTTCAAATGTTAAGACAGCTACAGTAATTGCATATATTGGTGTCTTTGCATCTGGGCTTTTAGGTGGATTTCTTTTCAACTTTTTTCTTGAAGATAAATCATTTCCAAGAGGGTGGATAGTTGTTTTAGAGTTGTATCCCGGGTTTGCATTATATCGTGGACTCTATGAGTTGGCATCATATGCCTTTGAAGCAAATGCTACAGGAAACCATGCAATGCGATGGGGAGATCTGAATGATAGCGTAAATGGCATGAGAGAGGTCTTAATTATCATGTTTATCGAGTGGTTTGTAGTGCTTGTTGTTGCTTATTACATTGATCAAGTATTAGGAAGTCGCAAAAGTCCACTTTTTTTCTTGAAAAGATTTCAGAAAAAGCCTTTGTCATCATTCCGGAAACCTAGTATTCAAAGGCAGGGGTCAAAAGTCTTTGTTCAGATGGAGAAATCTGATGTCAGTCAAGAGAGGGAAAAGGTTGAGCAGCTGCTACTTGAACCAACTATGAATCATGCAATTGTATGTGACAACCTAAAAAAGGTGTATCCAGGGAGAGATGGAAACCCAGAGAAATATGCAGTGAGAGGCTTATCTCTTGCTTTGCCTGAAGGGGAATGTTTTGGTATGCTTGGCCCCAATGGTGCTGGGAAGACCTCATTTATCAATATGATGATTGGTCTCACGAAGCCAACCTCTGGTGCAGCACTTGTTCAAGGTCTGAACATAAGAACTCAAATGGATGAAATATATACTAGCATGGGTGTATGTCCACAGCATGACTTGCTGTGGGAAACTCTAACTGGAAGAGAACACCTGCTCTTCTATGGCAGACTTAAAAATCTTAAAGGCTCGGCCTTAACACAAGCAGTGGAAGAATCTCTGAAAAGTGTAAACCTTTTCCATGGAGGAGTTGCTGATAAAAAAGCTGGAAAGTACAGTGGAGGAATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATCGGAGATCCCAAAGTCGTTTATATGGATGAACCAAGTACTGGATTAGACCCTGCGTCAAGAAACAATTTATGGAATGTTGTCAAGCGTGCAAAGCAGAATCGGGCAATCATACTAACCACTCATTCCATGGAAGAGGCAGAGGTGTTATGTGACCGAATAGGAATATTCGTAGATGGGAGCTGGCAGTGCATAGGGAATCCAAAAGAGCTAAAAGCAAGATATGGAGGAAGCTATGTGTTCACAATGACAACATCTGTAGATCATGAGAATGAAGTGGAAAACTTGGTGCACAGGCTGTCCCCAAATGCTAGCAAGACATACCATATCTCTGGAACCCAGAAATTTGAGCTGCCAAAAGAAGAGGTCAGAATAGCAGATGTCTTTCGGGCTGTTGGCATTGCAAAGAGAGACTTCACAGTATTTGCATGGGGTTTAACGGACACCACAATGGAAGATGTCTTCATTAAGGTTTCACGTGAGGCTCATGCATTCAACTCTTTGTCATAA 2838 0.4091 MADSPRGSSSFWTQANALLRKNLTFQKRNVKTNVRLILFPFFVCVVLVVIQVVIDKELDKPKNKCGCICTKRDGNQCLEEACGVEYSDTDQVATCAIPNPPEWPPLLQVPAPQYRAVQADIIPFSDLPNDSCRRTGSCPVTFLFTGSNQSFGETLFGNMFKSPFSVNTSDIVDSLARNVLGSESMPQNQNFLEPAFFSGLPIYYLQTQCIQNSTFSVPIQISTNTIQQEIRCAQGIHLWRNNSSEVNNELFKGYRKGNPERQINEIAAAFDFLNSSVNSFNVITWYNSTYKNDTGFGPIALARIPRLVNLVSNAFLQFLQGPGTEMLFEFVKEMPKPETPLRIDVASLLGSLFFTWVFLQLFPVFLTSLVYEKEKKLRIMMKMHGLGDGPYWMISYGYFFSLSVLYVLCFVIFGSLIGLKFFTLNDYSIQLVFYFIFINLQISLAFLVAATFSNVKTATVIAYIGVFASGLLGGFLFNFFLEDKSFPRGWIVVLELYPGFALYRGLYELASYAFEANATGNHAMRWGDLNDSVNGMREVLIIMFIEWFVVLVVAYYIDQVLGSRKSPLFFLKRFQKKPLSSFRKPSIQRQGSKVFVQMEKSDVSQEREKVEQLLLEPTMNHAIVCDNLKKVYPGRDGNPEKYAVRGLSLALPEGECFGMLGPNGAGKTSFINMMIGLTKPTSGAALVQGLNIRTQMDEIYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKKAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQNRAIILTTHSMEEAEVLCDRIGIFVDGSWQCIGNPKELKARYGGSYVFTMTTSVDHENEVENLVHRLSPNASKTYHISGTQKFELPKEEVRIADVFRAVGIAKRDFTVFAWGLTDTTMEDVFIKVSREAHAFNSLS 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2998 945 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 860 IPR003439 GO:0005524
Prci4g2998 945 FunFam ABC transporter A family member 7 612 888 - -
Prci4g2998 945 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524|GO:0016887
Prci4g2998 945 CDD ABC_subfamily_A 627 848 - -
Prci4g2998 945 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 589 939 IPR026082 GO:0016020|GO:0055085|GO:0140359
Prci4g2998 945 Gene3D - 614 886 IPR027417 -
Prci4g2998 945 Pfam ABC-2 family transporter protein 264 556 IPR013525 GO:0016020|GO:0140359
Prci4g2998 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 851 IPR027417 -
Prci4g2998 945 SMART AAA_5 653 836 IPR003593 GO:0016887
Prci4g2998 945 Pfam ABC transporter 645 789 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2998 Prci-Chr4 41650952 41659997 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2998 627 871 Calmodulin-binding Proteins AT2G36910 23.256 3.96e-12 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2998 4 41650952 41659997 Prci4g2998 4 41650952 41659997 ECH