Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2997 ATGGATGTGCTGTTTTGTACATCTTTATTGTGTACAGATCTCATAATGGGGAAGTCACCAGGAAAATGGATCAAAACTGTGCTATTTGGGAAAAAATCATCCAAATCAAATTTTTTGAAAGAAAGAGAGAAACTTGCTAAACAGAAAGAAGCACCAGTTGGTTCCAAGGCATCAGAAACTGCTTTGTCTTTTGATCCAAATCCTGATACTTTTGCTAGAAGTGAGAGGGATCCAGAACTGGAAAATCTTTCGCTACAGAATCAAGTCGATATTGCAGGACCTGATCATCAAGATGCCCCTCCTGATCCACAGAAAATTATGCAGAAGGAAGCTGCAACAAAGATGCAGGCTACTTTACCTTCTTATCCAGAGAAAATTAAGAAGGATGAAACTGCAATGACGATGCAGGCTACTTTACGTCCTGATCTAGAGAAAATTAAGGAGGAGGAAGCTGCAATGAAGGTGCAGGCTATTTTCAGGGGTTATTTGGCTCGCAGGGCTTTCAGGACTCTTAAAGGCATAATAAGATTGCAAGCACTTGTCCGAGGGCACTTGGTTAGGAGACAAGCTATTGCTACTTTATATTGTATGTATGGGATTATCAAGTTACAAGCACTTGTTCGTGGACGAAGAGTTAGGCAGTCTGATGTTGGGTTTGAAGTGCAAGAGAAGTGCAATCTTGTGAAGCCTCTGGTTGACAAGCGTGGCAACTCAGTTGGGACAACCACAAAAATTTCAGCAAATAGTTTTATACGCAAGCTTCTTGCTTCATCAACTGCAGCAACTTCTTTGCATCTTCAAAATGCTTCTGGGGATCCTAATTTAATCCTAAGTTGGTTGGAGCGCTGGTCAGCATCTCACTTTTGGAAACCAGTTCCCAAACCCAAGAAACCCCTAGACTCTAAATCTCAGGGAAAGCTGGGTAATATTTCAAATGGAGATGCTCAAATGAGCAAGGCAAAACGTAGTAACTGGAAGATTCCTTCTACAAGTTCAGACTTGGTCTCAGTGCAAGAAAATTCTGACTTTGAGAAACCAAAACGAAACCTGAGGAAAGTTTCAAGCAAGCCAACAGATCCAGCGCAGGAAAATTCAGAAAATGAGTTTGAGAAAGTTAAGCGTAACTTGAGAAAGGTTCATAACCCTGTTGTTGAGAATGCTGTTCAGTCAGAAGTTGAATCAGAGACTGTGGGGCAGCATTTGGAAAAGGCAGCAATTACCTCAGGCTCTGGTGTTTCAGAAGAAGGGGTCAAAAGTTCCTATGAGAAGAAAACAAAGGATGCAACATTGGCCATGTCCAAAGTGCCTGATGGAGAAATTACACTTAGAATTTCAGTTAGCAAGGGGGCACCTGACGTGCCTAGTACTCAAGTGCCTACCGATGCAGTGCACTTGAGAGAGATTACAAGTAGATGTAAAAGCATTTCCAGTGAAGAAGCTACCGAAGAGCTAAAAGATCCACGTGAGGGTTTTACTGACGAAAATTCTCCCCTAACAAACAGACATTTGAGTCTTAATGAAGATTCATCAAGAAATGAAAACAAGAAACCCAGTCAAAAATCTCCAACTCTATCTAAGCAGGAACTTTTAGAGGATGGTTTAAAGAATGGTCCAAATCCCACTTTACCAAGTTATATGGCGGCTACTGAATCTGCCAAGGCAAAGCTGAGAGTACAAGGATCCCCAAGGTTTGGACAAGATGGAAGTGAGAGAAACAACATTACCAGGAGACATTCTCTGCCATCTTCAAATAACAGTAAAATTAGTTCACATTCACCGAGAACACAGAGACCAGCTCAAGCAGAAGACAAAGGGGGACGCAGGAGTGACAGAACAATGGGTTCTTCTAGAGGTGGCAATGGAAAGTTAACTCAAGCAGAGTGGAGGAGGTGA 1893 0.42 MDVLFCTSLLCTDLIMGKSPGKWIKTVLFGKKSSKSNFLKEREKLAKQKEAPVGSKASETALSFDPNPDTFARSERDPELENLSLQNQVDIAGPDHQDAPPDPQKIMQKEAATKMQATLPSYPEKIKKDETAMTMQATLRPDLEKIKEEEAAMKVQAIFRGYLARRAFRTLKGIIRLQALVRGHLVRRQAIATLYCMYGIIKLQALVRGRRVRQSDVGFEVQEKCNLVKPLVDKRGNSVGTTTKISANSFIRKLLASSTAATSLHLQNASGDPNLILSWLERWSASHFWKPVPKPKKPLDSKSQGKLGNISNGDAQMSKAKRSNWKIPSTSSDLVSVQENSDFEKPKRNLRKVSSKPTDPAQENSENEFEKVKRNLRKVHNPVVENAVQSEVESETVGQHLEKAAITSGSGVSEEGVKSSYEKKTKDATLAMSKVPDGEITLRISVSKGAPDVPSTQVPTDAVHLREITSRCKSISSEEATEELKDPREGFTDENSPLTNRHLSLNEDSSRNENKKPSQKSPTLSKQELLEDGLKNGPNPTLPSYMAATESAKAKLRVQGSPRFGQDGSERNNITRRHSLPSSNNSKISSHSPRTQRPAQAEDKGGRRSDRTMGSSRGGNGKLTQAEWRR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2997 630 PANTHER IQ-DOMAIN 5-RELATED 16 589 - -
Prci4g2997 630 Pfam IQ calmodulin-binding motif 172 189 IPR000048 GO:0005515
Prci4g2997 630 Pfam IQ calmodulin-binding motif 150 169 IPR000048 GO:0005515
Prci4g2997 630 MobiDBLite consensus disorder prediction 340 354 - -
Prci4g2997 630 MobiDBLite consensus disorder prediction 46 77 - -
Prci4g2997 630 MobiDBLite consensus disorder prediction 473 630 - -
Prci4g2997 630 SMART iq_5 170 191 IPR000048 GO:0005515
Prci4g2997 630 SMART iq_5 147 169 IPR000048 GO:0005515
Prci4g2997 630 ProSiteProfiles IQ motif profile. 148 176 IPR000048 GO:0005515
Prci4g2997 630 MobiDBLite consensus disorder prediction 291 368 - -
Prci4g2997 630 Pfam Protein of unknown function (DUF4005) 521 609 IPR025064 -
Prci4g2997 630 Gene3D - 146 195 - -
Prci4g2997 630 MobiDBLite consensus disorder prediction 473 492 - -
Prci4g2997 630 MobiDBLite consensus disorder prediction 304 339 - -
Prci4g2997 630 ProSiteProfiles IQ motif profile. 172 199 IPR000048 GO:0005515
Prci4g2997 630 MobiDBLite consensus disorder prediction 597 611 - -
Prci4g2997 630 MobiDBLite consensus disorder prediction 565 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2997 Prci-Chr4 41633309 41638018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2997 16 630 IQD Protein Family AT1G74690 42.047 1.90e-116 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2997 - - pcin:129309270 1218.76