Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2995 ATGGGGAAGTCACCAGGAAAATGGATCAAAACTGTGCTATTTGGGAAAAAATCATCCAAATCAAATTTTTTGAAAGAAAGAGAGAAACTTGCTAAACAGAAAGAAGCACCAGTTGGTTCCAAGGCATCAGAAACTGCTTTGTCTTTTGATCCAAATCCTGATACTTTTGCTAGAAGTGAGAGGGATCCAGAACTGGAAAATCTTTCGCTACAGAATCAAGTCGATATTGCAGGACCTGATCATCAAGATGCCCCTCCTGATCCACAGAAAATTATGCAGAAGGAAGCTGCAACAAAGATGCAGGCTACTTTACCTTCTTATCCAGAGAAAATTAAGAAGGATGAAACTGCAATGACGATGCAGGCTACTTTACGTCCTGATCTAGAGAAAATTAAGGAGGAGGAAGCTGCAATGAAGGTGCAGGCTATTTTCAGGGGTTATTTGGCTCGCAGGGCTTTCAGGACTCTTAAAGGCATAATAAGATTGCAAGCACTTGTCCGAGGGCACTTGGTTAGGAGACAAGCTATTGCTACTTTATATTGTATGTATGGGATTATCAAGTTACAAGCACTTGTTCGTGGACGAAGAGTTAGGCAGTCTGATGTTGGGTTTGAAGTGCAAGAGAAGTGCAATCTTGTGAAGCCTCTGGTTGACAAGCGTGGCAACTCAGTTGGGACAACCACAAAAATTTCAGCAAATAGTTTTATACGCAAGCTTCTTGCTTCATCAACTGCAGCAACTTCTTTGCATCTTCAAAATGCTTCTGGGGATCCTAATTTAATCCTAAGTTGGTTGGAGCGCTGGTCAGCATCTCACTTTTGGAAACCAGTTCCCAAACCCAAGAAACCCCTAGACTCTAAATCTCAGGGAAAGCTGGGTAATATTTCAAATGGAGATGCTCAAATGAGCAAGGCAAAACGTAGTAACTGGAAGATTCCTTCTACAAGTTCAGACTTGGTCTCAGTGCAAGAAAATTCTGACTTTGAGAAACCAAAACGAAACCTGAGGAAAGTTTCAAGCAAGCCAACAGATCCAGCGCAGGAAAATTCAGAAAATGAGTTTGAGAAAGTTAAGCGTAACTTGAGAAAGGTTCATAACCCTGTTGTTGAGAATGCTGTTCAGTCAGAAGTTGAATCAGAGACTGTGGGGCAGCATTTGGAAAAGGCAGCAATTACCTCAGGCTCTGGTGTTTCAGAAGAAGGGGTCAAAAGTTCCTATGAGAAGAAAACAAAGGATGCAACATTGGCCATGTCCAAAGTGCCTGATGGAGAAATTACACTTAGAATTTCAGTTAGCAAGGGGGCACCTGACGTGCCTAGTACTCAAGTGCCTACCGATGCAGTGCACTTGAGAGAGATTACAAGTAGATGTAAAAGCATTTCCAGTGAAGAAGCTACCGAAGAGCTAAAAGATCCACGTGAGGGTTTTACTGACGAAAATTCTCCCCTAACAAACAGACATTTGAGTCTTAATGAAGATTCATCAAGAAATGAAAACAAGAAACCCAGTCAAAAATCTCCAACTCTATCTAAGCAGGAACTTTTAGAGGATGGTTTAAAGAATGGTCCAAATCCCACTTTACCAAGTTATATGGCGGCTACTGAATCTGCCAAGGCAAAGCTGAGAGTACAAGGATCCCCAAGGTTTGGACAAGATGGAAGTGAGAGAAACAACATTACCAGGAGACATTCTCTGCCATCTTCAAATAACAGTAAAATTAGTTCACATTCACCGAGAACACAGAGACCAGCTCAAGCAGAAGACAAAGGGGGACGCAGGAGTGACAGAACAATGGGTTCTTCTAGAGGTGGCAATGGAAAGTTAACTCAAGCAGAGTGGAGGAGGTGA 1848 0.4221 MGKSPGKWIKTVLFGKKSSKSNFLKEREKLAKQKEAPVGSKASETALSFDPNPDTFARSERDPELENLSLQNQVDIAGPDHQDAPPDPQKIMQKEAATKMQATLPSYPEKIKKDETAMTMQATLRPDLEKIKEEEAAMKVQAIFRGYLARRAFRTLKGIIRLQALVRGHLVRRQAIATLYCMYGIIKLQALVRGRRVRQSDVGFEVQEKCNLVKPLVDKRGNSVGTTTKISANSFIRKLLASSTAATSLHLQNASGDPNLILSWLERWSASHFWKPVPKPKKPLDSKSQGKLGNISNGDAQMSKAKRSNWKIPSTSSDLVSVQENSDFEKPKRNLRKVSSKPTDPAQENSENEFEKVKRNLRKVHNPVVENAVQSEVESETVGQHLEKAAITSGSGVSEEGVKSSYEKKTKDATLAMSKVPDGEITLRISVSKGAPDVPSTQVPTDAVHLREITSRCKSISSEEATEELKDPREGFTDENSPLTNRHLSLNEDSSRNENKKPSQKSPTLSKQELLEDGLKNGPNPTLPSYMAATESAKAKLRVQGSPRFGQDGSERNNITRRHSLPSSNNSKISSHSPRTQRPAQAEDKGGRRSDRTMGSSRGGNGKLTQAEWRR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2995 615 ProSiteProfiles IQ motif profile. 157 184 IPR000048 GO:0005515
Prci4g2995 615 MobiDBLite consensus disorder prediction 451 477 - -
Prci4g2995 615 MobiDBLite consensus disorder prediction 389 409 - -
Prci4g2995 615 MobiDBLite consensus disorder prediction 276 353 - -
Prci4g2995 615 ProSiteProfiles IQ motif profile. 133 161 IPR000048 GO:0005515
Prci4g2995 615 PANTHER IQ-DOMAIN 5-RELATED 1 574 - -
Prci4g2995 615 Gene3D - 131 180 - -
Prci4g2995 615 MobiDBLite consensus disorder prediction 429 615 - -
Prci4g2995 615 MobiDBLite consensus disorder prediction 325 339 - -
Prci4g2995 615 Pfam IQ calmodulin-binding motif 157 174 IPR000048 GO:0005515
Prci4g2995 615 Pfam IQ calmodulin-binding motif 135 154 IPR000048 GO:0005515
Prci4g2995 615 MobiDBLite consensus disorder prediction 582 596 - -
Prci4g2995 615 MobiDBLite consensus disorder prediction 30 63 - -
Prci4g2995 615 MobiDBLite consensus disorder prediction 550 581 - -
Prci4g2995 615 SMART iq_5 155 176 IPR000048 GO:0005515
Prci4g2995 615 SMART iq_5 132 154 IPR000048 GO:0005515
Prci4g2995 615 Pfam Protein of unknown function (DUF4005) 506 594 IPR025064 -
Prci4g2995 615 MobiDBLite consensus disorder prediction 289 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2995 Prci-Chr4 41632153 41638018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2995 1 615 IQD Protein Family AT1G74690 42.047 1.29e-116 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2995 - - pcin:129309270 1188.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2995 4 41632153 41638018 Prci9g1561 9 28337990 28343747 ECH
Prci4g2995 4 41632153 41638018 Prci4g2995 4 41632153 41638018 ECH