Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2988 ATGACGAAAGAAGAGCTTCAGAACGAGAAAGATTACATGCTTATTGATGGGTGCGAAACTGAAGCGCCTGGGCAAAACCAGGGAAGTCATGTTCATAGCGAGTTCAATCCGGATCACCTTAAAGCATTTTACGGAAAGCTGTTTCCTTATGCCGATTTTTTCAGATGGATGTCTTACGGCAATGATGGGAAGCACCCGGGTTGTGATCCCTCTTATATCAGCAGGAGGGAATTTTCGTTCACGCTTGACAACGATATATTTCTCCGATTCCAATCTTTCCACAGTGCCGTGGAGCTTGAAAACTCCATGAAAGAGAAATGCCCATTTAAGATTGATATTGGACCTGTGTATAGCGTGGAGCCCACAAAAAGGCATGCCTATGCTCAGAGTGGTGATAATGTTTTCGCTCCAGTTGAGAGAGAGCTAATCTTTGATATTGATATGACAGATTACGATGATGTTAGGTACTGCTGCACTGGTGCTGATGTTTGCTTGAATTGCTGGCCGTTGATGACTATAGCTATTAAAGTGATTGATACTGCCTTACGAGATGATTTTGGCTTTAAACATATTCTATGGGCTTATAGTGGCCGCCGTGGTGTTCACTGTTGGGTCTGTGATGGGAAGGCAAGAAGGTTGACTAATGAGCAGAGAGCGGCAATTGCTGACTATTTTCGTGTCTACAAGGGAAATGAGAATAGTCATAAGAAGGTTTCACTTACCGGTCATGCTCTTCATCCTTTCCTTGTGAGAGCATACACTGAAGTTCTTAAAGATTTTTTTGAGAAAGGACTACTAATAAGTCAAAATTTACTTTCTACTGAAGAGAGATATGAGATGATCTTAGAGTTGATTCCTGATGCAGCTATCGCTTCTGAACTTAGGGGCAGATGGCAAGAAAATAGGCGGTCTTCAACCGCAAAAGAAGACATTAATGTTGTTCGATGGGAACAACTCAAACATTTGCTATCAAAGAATAAGGGACAAGGACTGCGAAGGTGTGTTGAAGAGATTGTGTTTTCCTTTACTTATCCTAGACTTGATATGGAGGTTTCAAAACACATGAACCACTTGCTTAAAGCTCCATTCTGTGTACACCCAAAAACAGGCCGCATTTGTGTCCCTATTGATCCAAATCACTGTGAGCAGTTTGATCCTACCACAGTACCTACTCTTTCACAGCTTTTAGAAGAGCTTAACGAAAAAGGTCCAACAGATGATTTAGATGGTGAATGGAAGAGAACTTCACTTGATGGTGCGGTCAGTCTTTTCAGAACGTCATTCTTAGAGCCTCTACTTAAAGCTTGCAAGGAGGAGATAGAAAGTTCCTACAATGCAAAATTGCAGCAGTCTAAAAATTCCTTTAGCTGGTAA 1374 0.4163 MTKEELQNEKDYMLIDGCETEAPGQNQGSHVHSEFNPDHLKAFYGKLFPYADFFRWMSYGNDGKHPGCDPSYISRREFSFTLDNDIFLRFQSFHSAVELENSMKEKCPFKIDIGPVYSVEPTKRHAYAQSGDNVFAPVERELIFDIDMTDYDDVRYCCTGADVCLNCWPLMTIAIKVIDTALRDDFGFKHILWAYSGRRGVHCWVCDGKARRLTNEQRAAIADYFRVYKGNENSHKKVSLTGHALHPFLVRAYTEVLKDFFEKGLLISQNLLSTEERYEMILELIPDAAIASELRGRWQENRRSSTAKEDINVVRWEQLKHLLSKNKGQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRICVPIDPNHCEQFDPTTVPTLSQLLEELNEKGPTDDLDGEWKRTSLDGAVSLFRTSFLEPLLKACKEEIESSYNAKLQQSKNSFSW 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2988 457 Pfam DNA primase small subunit 144 377 IPR002755 GO:0003896|GO:0006269
Prci4g2988 457 Gene3D DNA primase, PRIM domain 26 438 - -
Prci4g2988 457 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 41 397 IPR014052 GO:0003896|GO:0006269
Prci4g2988 457 CDD AE_Prim_S 49 386 IPR014052 GO:0003896|GO:0006269
Prci4g2988 457 FunFam DNA primase 27 438 - -
Prci4g2988 457 SUPERFAMILY Prim-pol domain 33 401 - -
Prci4g2988 457 PANTHER DNA PRIMASE SMALL SUBUNIT 28 442 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2988 1 457 Core DNA Replication Machinery Family AT5G41880 61.957 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2988 K02684 - qsa:O6P43_034334 771.541