Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2987 ATGATGCAGGCTGAGAAGCTAGAATCTGCGAAAACGGAAATGGGTGAGGTGAGAGAAGAAAACCAAAGATTGAAGCAGTGTTTGGATCGAGTTCTGAAGGATTACAGAACACTGCAAATGCAATTCAAAGATATATTTCAAAAGGAAACCAAAGAATCAACTTCTGATCATGATCATAGTGATGGTCGAGAAATTATTATAACTGAGGAATATTCTGATGAGCTAGTTTCTCTGAGCCTTGGAAGAGCTATTCCCAGTAATAATGATAATCCAATTAGAAACCATGAGAAAAGCAAAGGTTTGAAGCCATTATTATTGAAGGATATTGAAGAATGCGATGAAGAGGACTTGGCTCTTGGATTGGACTGCAAATTCGAAACATCAAAGTCAGGAAGCATAACTCATGATGAGGATGAGGATAATAATAATAATTCGCCAAAGATTAATCCAAGCCATACCACTAGTTCTGAAGAGCCGCCCAAGGAAGAGGAGACCTGGCCACCAAGTAAAGCACTCAAAACAACCAGAGATACTACTACTTCTGGAGAAGACGAAGTTTCCCAACACAATCCTGCAAAGAAAGCTAGGGTTTGTGTGAGAGCAAGATGTGACGCCCAAACTATGAACGATGGATGTCAATGGAGAAAATATGGACAAAAAATCTCAAAGGGAAATCCATGCCCTAGAGCTTATTATCGTTGCACAGTTGCACCATCATGCCCAGTAAAAAAGCAGGTGCAAAGATGTGCTGAGGATTTGTCCGTTTTAGTTACCACTTATGAGGGAATCCACAACCACCCTCTTCCTCTCTCAGCCACCGCCATGGCTTCCACTACTTCTGCAGCTGTTTCCATGCTTTTGTCTGGCTCTTCTTCATCAACTTCTTCAGCTCGCCCTTCATCCGCCACTTCAGCTGATCTCTATGGCCTGAACTTCTCCTTGTCAGATGGTTTCAGCAGATCAAAGCCATTATATCTCTCCAATCCTTCATTCTCTTCATTGCCTTCTCACCCAACAATCACTCTTGACCTCACCACAAATCCTGCAGCCTCCAGGTTCATGACCTCATCATCATCAAACTACAACCCAGCTCCACGATCGTCGTCGTCGTCGTCGTACCCTTCTTCTTCCACAAGTCTCAATTTTAGTTCCCCAAATAATAATAATAATTTTGTTAGCTATCACAGTAATAATAACAGGAACGTTTTCAGCTCCGTGAACCTTGGAAGGTCGACAGTGGATAGTATCTACAGTCTGCCTTTCGTGCAGAAGAACAGTGTTATCAACAGCACAACCCATCCTCCACCACCTGCTCTACCAGATACTATCGCCGCGGCAACCAAGGCCATCGCGGCGGACCCAAAGTTTCAGTCTGCTTTGGCAGTGGCGCTCAGTTCAATTATTGGCACAGGAAGTGGAATTAGAAGCAACAATAGTGGCGGTGCCGGAGAAAACTTGACTCAGCAAATGAAATGGGGAGGGCTGTTTCCAGCATTATGA 1500 0.4373 MMQAEKLESAKTEMGEVREENQRLKQCLDRVLKDYRTLQMQFKDIFQKETKESTSDHDHSDGREIIITEEYSDELVSLSLGRAIPSNNDNPIRNHEKSKGLKPLLLKDIEECDEEDLALGLDCKFETSKSGSITHDEDEDNNNNSPKINPSHTTSSEEPPKEEETWPPSKALKTTRDTTTSGEDEVSQHNPAKKARVCVRARCDAQTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVKKQVQRCAEDLSVLVTTYEGIHNHPLPLSATAMASTTSAAVSMLLSGSSSSTSSARPSSATSADLYGLNFSLSDGFSRSKPLYLSNPSFSSLPSHPTITLDLTTNPAASRFMTSSSSNYNPAPRSSSSSSYPSSSTSLNFSSPNNNNNFVSYHSNNNRNVFSSVNLGRSTVDSIYSLPFVQKNSVINSTTHPPPPALPDTIAAATKAIAADPKFQSALAVALSSIIGTGSGIRSNNSGGAGENLTQQMKWGGLFPAL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2987 499 MobiDBLite consensus disorder prediction 1 20 - -
Prci4g2987 499 MobiDBLite consensus disorder prediction 177 191 - -
Prci4g2987 499 Gene3D WRKY domain 192 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci4g2987 499 MobiDBLite consensus disorder prediction 130 191 - -
Prci4g2987 499 ProSiteProfiles WRKY domain profile. 203 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g2987 499 MobiDBLite consensus disorder prediction 156 170 - -
Prci4g2987 499 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 6 475 IPR044810 GO:0003700
Prci4g2987 499 Coils Coil 7 27 - -
Prci4g2987 499 SUPERFAMILY WRKY DNA-binding domain 201 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci4g2987 499 Pfam WRKY DNA -binding domain 209 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g2987 499 SMART WRKY_cls 208 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g2987 499 MobiDBLite consensus disorder prediction 355 382 - -
Prci4g2987 499 FunFam probable WRKY transcription factor 31 193 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2987 Prci-Chr4 41599246 41601507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2987 6 477 WRKY Transcription Factor Family AT1G18860 40.741 5.06e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci4g2987 WRKY 3.8e-23 CL0274