Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2985 ATGGAGTTTCCTTCAGGAAGATCTGACCATGACAGTAGAGCCAAGGAAGAGAAGAGGAGTGAATCTGTTGGTGCTGGTGATGAAGATCCTCGAAAAGAAAAGATTGATATTGAGGCGCCACCAGTGGATACTTCTGCACCAATAATTGTATCTTCAGCCAAAAAGGAAGAGCAGGCTGAGAAGCTAGAATCTGCGAAAACGGAAATGGGTGAGGTGAGAGAAGAAAACCAAAGATTGAAGCAGTGTTTGGATCGAGTTCTGAAGGATTACAGAACACTGCAAATGCAATTCAAAGATATATTTCAAAAGGAAACCAAAGAATCAACTTCTGATCATGATCATAGTGATGGTCGAGAAATTATTATAACTGAGGAATATTCTGATGAGCTAGTTTCTCTGAGCCTTGGAAGAGCTATTCCCAGTAATAATGATAATCCAATTAGAAACCATGAGAAAAGCAAAGGTTTGAAGCCATTATTATTGAAGGATATTGAAGAATGCGATGAAGAGGACTTGGCTCTTGGATTGGACTGCAAATTCGAAACATCAAAGTCAGGAAGCATAACTCATGATGAGGATGAGGATAATAATAATAATTCGCCAAAGATTAATCCAAGCCATACCACTAGTTCTGAAGAGCCGCCCAAGGAAGAGGAGACCTGGCCACCAAGTAAAGCACTCAAAACAACCAGAGATACTACTACTTCTGGAGAAGACGAAGTTTCCCAACACAATCCTGCAAAGAAAGCTAGGGTTTGTGTGAGAGCAAGATGTGACGCCCAAACTATGAACGATGGATGTCAATGGAGAAAATATGGACAAAAAATCTCAAAGGGAAATCCATGCCCTAGAGCTTATTATCGTTGCACAGTTGCACCATCATGCCCAGTAAAAAAGCAGGTGCAAAGATGTGCTGAGGATTTGTCCGTTTTAGTTACCACTTATGAGGGAATCCACAACCACCCTCTTCCTCTCTCAGCCACCGCCATGGCTTCCACTACTTCTGCAGCTGTTTCCATGCTTTTGTCTGGCTCTTCTTCATCAACTTCTTCAGCTCGCCCTTCATCCGCCACTTCAGCTGATCTCTATGGCCTGAACTTCTCCTTGTCAGATGGTTTCAGCAGATCAAAGCCATTATATCTCTCCAATCCTTCATTCTCTTCATTGCCTTCTCACCCAACAATCACTCTTGACCTCACCACAAATCCTGCAGCCTCCAGGTTCATGACCTCATCATCATCAAACTACAACCCAGCTCCACGATCGTCGTCGTCGTCGTCGTACCCTTCTTCTTCCACAAGTCTCAATTTTAGTTCCCCAAATAATAATAATAATTTTGTTAGCTATCACAGTAATAATAACAGGAACGTTTTCAGCTCCGTGAACCTTGGAAGGTCGACAGTGGATAGTATCTACAGTCTGCCTTTCGTGCAGAAGAACAGTGTTATCAACAGCACAACCCATCCTCCACCACCTGCTCTACCAGATACTATCGCCGCGGCAACCAAGGCCATCGCGGCGGACCCAAAGTTTCAGTCTGCTTTGGCAGTGGCGCTCAGTTCAATTATTGGCACAGGAAGTGGAATTAGAAGCAACAATAGTGGCGGTGCCGGAGAAAACTTGACTCAGCAAATGAAATGGGGAGGGCTGTTTCCAGCATTATGA 1665 0.4378 MEFPSGRSDHDSRAKEEKRSESVGAGDEDPRKEKIDIEAPPVDTSAPIIVSSAKKEEQAEKLESAKTEMGEVREENQRLKQCLDRVLKDYRTLQMQFKDIFQKETKESTSDHDHSDGREIIITEEYSDELVSLSLGRAIPSNNDNPIRNHEKSKGLKPLLLKDIEECDEEDLALGLDCKFETSKSGSITHDEDEDNNNNSPKINPSHTTSSEEPPKEEETWPPSKALKTTRDTTTSGEDEVSQHNPAKKARVCVRARCDAQTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVKKQVQRCAEDLSVLVTTYEGIHNHPLPLSATAMASTTSAAVSMLLSGSSSSTSSARPSSATSADLYGLNFSLSDGFSRSKPLYLSNPSFSSLPSHPTITLDLTTNPAASRFMTSSSSNYNPAPRSSSSSSYPSSSTSLNFSSPNNNNNFVSYHSNNNRNVFSSVNLGRSTVDSIYSLPFVQKNSVINSTTHPPPPALPDTIAAATKAIAADPKFQSALAVALSSIIGTGSGIRSNNSGGAGENLTQQMKWGGLFPAL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2985 554 SUPERFAMILY WRKY DNA-binding domain 256 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci4g2985 554 Coils Coil 55 82 - -
Prci4g2985 554 MobiDBLite consensus disorder prediction 1 39 - -
Prci4g2985 554 Pfam WRKY DNA -binding domain 264 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g2985 554 MobiDBLite consensus disorder prediction 54 77 - -
Prci4g2985 554 FunFam probable WRKY transcription factor 31 248 325 - -
Prci4g2985 554 MobiDBLite consensus disorder prediction 410 437 - -
Prci4g2985 554 MobiDBLite consensus disorder prediction 232 246 - -
Prci4g2985 554 ProSiteProfiles WRKY domain profile. 258 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g2985 554 MobiDBLite consensus disorder prediction 185 246 - -
Prci4g2985 554 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 34 530 IPR044810 GO:0003700
Prci4g2985 554 SMART WRKY_cls 263 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g2985 554 MobiDBLite consensus disorder prediction 1 77 - -
Prci4g2985 554 MobiDBLite consensus disorder prediction 211 225 - -
Prci4g2985 554 Gene3D WRKY domain 247 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2985 Prci-Chr4 41598118 41601507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2985 61 532 WRKY Transcription Factor Family AT1G18860 40.546 8.12e-79 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci4g2985 WRKY 4.3e-23 CL0274