Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2984 ATGATCAGGTTTATCATAAACAGAGGCGTGCAAGTTTCGACTTGGCGGAAGTCTCTTGCCTTTTTCAATCTCTCACGCAGGTCTGCTCATTCATCATTTGCAACTGTTGATGCTGAAGAGATATCAGGTTCTAGACCTGCTGAAGTTCACAACTTGGTGCAGGGTAAATGGATAGGAGCCTCAAAGTGGAACACTATTGTGGATCCTTTAAATGGAGAGCCCTTTATTAAAGTTGCTGATGTTGATGAAATGAGCATTCAGCCTTTTGTGCAAAGCTTGTCCAGCTGTCCGAAACACGGTCTACATAATCCATTTAAAGAGCCAGAGAGGTATCTTTTGTTTGGAGAAATATCTGCTAAGGCAGCTCACTTGCTGTCACTTCCAAAGGTTTCAGATTTCTTTACAAGGTTAATACAACGGGTTTCTCCAAAGAGTTATGCACAGGCTCATGCTGAAGTTTATGTAACACAGAAGTTTCTAGAGAATTTCTCTGGAGATCAGGTTCGTTTCTTGGCAAGGTCTTTTGCAGTACCTGGAAATCATCTTGGTCAGCAAAGTCATGGTTTTCGCTGGCCATATGGCCCAGTGGCACTCATTACTCCTTTTAATTTTCCCTTAGAGATACCAGTCCTTCAGTTAATGGGTGCACTTTACATGGGCAACAAACCAGTCCTTAAAGTTGACAGCAAGGTGAGCATCGTCATGGACCAAATGCTACGTCTGCTTCATTGCTGTGGGTTGCCTGTTGAAGATGTTGACTTCATAAATTCTGATGGGAAGACGATGAACAAGCTATTGCTGGAGGCAAAACCTCGAATGACCCTTTTCACTGGTAGCTCAAGAGTGGCTGAAAAACTGGCTGTTGATTTAAAGGGTCGCATTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTTGGCCCTGATGTCCAAGAGGAAGACTATATTGCCTGGGTCTGTGACCAGGATGCATATGCATGTAGTGGCCAGAAGTGCTCAGCACAATCATTGTTATTTATTCATGAGAACTGGCCTAAAGATTCAATGATATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGAAGACTTGACCATTGGTCCAGTCCTGACTGTAACGACTGAAACAATGCTAGAGCACAAGAATAACTTGCTTCAGATACCAGGTTCAAAGCTGCTCTTTGGGGGCCAGCCTTTAGAGAAACATGCAATTCCTTCAATATATGGTGCTATAAAACCAACTGCGATTTACATTCCTCTTGAGGAAATTGTGAAGGAAAACAATTATGAGCTTGTTACAAAAGAAATTTTTGGCCCGTTCCAGATTGTCACCGACTATACAAGCAATCAACTCCCAGCGGTATTGGATGTTTTGGAGAGAATGAATGCCCATTTAACAGCTGCTGTAGTTTCAAATGATCCCCACTTTTTACAGGAAGTAATTGGCAAAACAGTTAACGGGACTACTTATGCTGGTCTAAGAGCAAGGACAACTGGAGCTCCACAGAACCACTGGTTTGGACCTGCTGGGGATCCTAGAGGTGCAGGAATCGGAACCCCAGAGGCAATAAAGCTTGTCTGGTCTTGTCACAGGGAGATTATTTATGATGTTGGACCCATCCCAAAGAATTGGGAAGTTCCACCTTCATCTTGA 1656 0.4293 MIRFIINRGVQVSTWRKSLAFFNLSRRSAHSSFATVDAEEISGSRPAEVHNLVQGKWIGASKWNTIVDPLNGEPFIKVADVDEMSIQPFVQSLSSCPKHGLHNPFKEPERYLLFGEISAKAAHLLSLPKVSDFFTRLIQRVSPKSYAQAHAEVYVTQKFLENFSGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVALITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMDQMLRLLHCCGLPVEDVDFINSDGKTMNKLLLEAKPRMTLFTGSSRVAEKLAVDLKGRIKLEDAGFDWKILGPDVQEEDYIAWVCDQDAYACSGQKCSAQSLLFIHENWPKDSMISKLKDLAERRKLEDLTIGPVLTVTTETMLEHKNNLLQIPGSKLLFGGQPLEKHAIPSIYGAIKPTAIYIPLEEIVKENNYELVTKEIFGPFQIVTDYTSNQLPAVLDVLERMNAHLTAAVVSNDPHFLQEVIGKTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDVGPIPKNWEVPPSS 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2984 551 Pfam Aldehyde dehydrogenase family 67 494 IPR015590 GO:0016491
Prci4g2984 551 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 47 310 IPR016162 GO:0016491
Prci4g2984 551 SUPERFAMILY ALDH-like 49 519 IPR016161 GO:0016491
Prci4g2984 551 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 30 550 IPR044638 GO:0004029
Prci4g2984 551 FunFam probable aldehyde dehydrogenase 42 300 - -
Prci4g2984 551 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Prci4g2984 551 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 311 494 IPR016163 GO:0016620
Prci4g2984 551 FunFam Aldehyde dehydrogenase 12 308 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2984 Prci-Chr4 41574609 41584119 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2984 1 551 Aldehyde Dehydrogenase Gene Family AT5G62530 77.878 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2984 K00294 - qsa:O6P43_022809 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2984 4 41574609 41584119 Prci4g2984 4 41574609 41584119 ECH