Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2982 ATGAATTTGCAGAGCAGTTTTCCCCTGCTTTTGCAACAATACACAGCGCTTTTGAAGAAGAATTTCTTGCTCTCATGGCGGAACAGGAAGGCTTCGTTCCTTCAACTCCTCTCTCCTCTCTTCTTCTTGTTTCTTATATTCGCCATTGACAGGGCCATTCAGGCTCGCTACTCCTCGTCCACGGTTAACGAGAGCGTCACCGATCCTGACCCGTTGCTCTCGCCTCCGATTACTCCCTGTGAGGAAAAGTTCTTCGTTAAGCTTCCTTGCTATGATTTCGCTTGGAGCGGAAATGGGAATCCCAAATTTCAGACCATTGTTGGTCGTATCATGGCTAACAATCCTGGCCGGCCCATCCCCCCCGCTAAGGTTATATCCTTTAGCAATGGGGCTGAAGTGGATGACTGGCTTTTCAAGAATCCTTTGCGTTGTCCAGGTGCTCTGCATTTCACCGAAAAAAATGCGACTGTCATTGGCTATGGTGTGCAGACAAATTCAACCTTTATACAAAAGCGAGGGCACTATGAAGACCCCACTTTTGCTTTTCAACTCCCACTTCAGCTTGCTGCGGAGCGTGAAATTGCTAGATACCTGATTGGAGACCCATCCTTCAGCTGGAGCTTTTCTTTCAAAGAATTTGCACACCCTGCCATAGAATATTTCTCAACAGTGGGTTCAATAGGTCCAGCATTTTTCCTTGCAATCGCCATGTTTAACTTTGTTCTTCAGATGGGCTCTCTGGTGACGGAAAAAGAAAATAAACTTCGTCAGGCAATGATGATGATGGGCCTCTATGACTCCGCTTATTGGTTATCCTGGATTACCTGGGAGGCAGTTATTACACTTATATCGTCCCTTCTCATTGTTCTTTTCGGAATGATGTTTCAATTTGACGTTTTCTTGAAAAACAGTTTCGCGGTCATGTTTTTTCTGTTCTTCCTTTTTGAACTCAGCATGACAGGATTTGCCTTCATGCTATCTTCTTTCATTCGTAAATCATCTTCAGCCACAACAATGGGATTCTCCATATTTATTATTGGGTTTTTGACTCAGATTGTTGTACAAGCAGGATATCCATATGATAATGACACTTCCCAGGCTTTCCGAATCGTCTGGTCATTTTTCCCACCAAATCCGTTTGCTCAAGGTCTAAACGTGCTTGCAAAAGCAACTTCCACTCCTGAAGACGATGGTGTTAGATGGAGTAAACGGGGAAAATGTGCTCCAAACGATGAGGATTGTTTCATAACAATTAATGATATTTATATGTGGCTGTTGGGTACATTCTTTCTGTGGTTTATTCTGGCTATCTACTTTGATAACATAATTCCAAATGCATCTGGTGTGAGGAAATCAGTCTTCTACTTTCTAAACCCCAGATATTGGATGGGAAAAGGAGGAGATAAAGTGAGAGAGGGCGGGGTTTGTAGTTGTGTAGGTTCAGTCCCGCCACAAGAGTATATCACACCAGATGATGAAGATGTCCTTGAAGAGGAAAACATTGTAAAGCAGCAAGCAGCAGAAGGTATGGTAGACCCAAATGTCGCTGTCCAGATACGTGGCCTTGCAAAGACATATCCTGGTGCATTGAACATTGGTTGCTGCTGTAAATGCAAAAGAACTGCTTCTTACGATGCTGTTAAGGGCTTATGGGTCAATTTTGCAAAGGACCAGTTGTTTTGTCTTCTGGGACCCAATGGAGCTGGGAAAACTACTGTTATTAATTGTTTGACTGGGATAACTCCAGCCACTGATGGAGATGCATTGATATATGGACATTCCATAAGAAGCTCCACCGGCATGTCAAATATTCAAAAGCTTATAGGCGTATGTCCCCAGTTTGATATCTTATGGGATGCATTGTCTGGTCAAGAGCACCTCCATCTCTTTGCTAGCATTAAGGGCCTTCCCCCAACTTCTATCAAATCAATTACTCAGGAGTCATTAGCAGAAGTGAGACTAATAGAGTCAGCCAAAGTGAGAGCTGGAAGTTACAGTGGGGGGATGAAACGCCGTCTTAGTGTGGCCATATCCCTGATTGGTGATCCTAAGCTAGTCATTATGGATGAACCGACAACTGGCATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATTGAAAATGCAAAACGGGGGCGTGCTATTGTCCTTACAACACACTCTATGGAAGAGGCAGACATTCTAAGTGACCGCATTGGAATCATGGCGAAAGGACGACTTCGCTGCATTGGCACGTCAATCCGGTTGAAATCACGCTTTGGTACTGGTTTTATAGCTAACATCAGCTTCCATGGAAACAATTTTGAACAAAGTCCTGCCAATAGAGATGCAACTTCTACAATAAATCATGAGACAGTGAAGCAATTCTTTAAGAATAATTTAGATGTGATACCAAAGGAAGAGAACAGTGCCTACTTAACTTATGTGATTCCTCATGATAGAGAGGGTCTCTTGATGAAATTTTTTGAGGAACTCCAAGATAGAGAAGAAGAATTTGGCATATCTGACATCCAGCTTGGTCTTGCAACTCTTGAAGAGGTTTTCTTGAATATTGCAAGACAAGCAGAGCTAGAAAGTGCTGCAGCTGAAGGGAGCTTGGTAACTCTGACTTTGACTTCTGGTGAATCTGTTAAGATACCTGTGGGAGCAAGGTTTGTGGGGATTCCAGGGACTGAATCAGCTGAAAACCCCAGAGGGATTATGGTGGAAGTATATTGGGAGCAAGATGATACTGGTTCCCTTTGCATTGCTGGACACTCACGGGAAATTCCAGTACCTCCTAGTGTTGAACTATCTGCTTCTCCAGCCTTAACAAGACGTCGAAGTCGCCGGCGGTCAGAGCCAGTGGAGGGGATTGTGATTGACCCCAGTCAAGTTAGTACCGTCAATTTCCAGTGA 2901 0.4385 MNLQSSFPLLLQQYTALLKKNFLLSWRNRKASFLQLLSPLFFLFLIFAIDRAIQARYSSSTVNESVTDPDPLLSPPITPCEEKFFVKLPCYDFAWSGNGNPKFQTIVGRIMANNPGRPIPPAKVISFSNGAEVDDWLFKNPLRCPGALHFTEKNATVIGYGVQTNSTFIQKRGHYEDPTFAFQLPLQLAAEREIARYLIGDPSFSWSFSFKEFAHPAIEYFSTVGSIGPAFFLAIAMFNFVLQMGSLVTEKENKLRQAMMMMGLYDSAYWLSWITWEAVITLISSLLIVLFGMMFQFDVFLKNSFAVMFFLFFLFELSMTGFAFMLSSFIRKSSSATTMGFSIFIIGFLTQIVVQAGYPYDNDTSQAFRIVWSFFPPNPFAQGLNVLAKATSTPEDDGVRWSKRGKCAPNDEDCFITINDIYMWLLGTFFLWFILAIYFDNIIPNASGVRKSVFYFLNPRYWMGKGGDKVREGGVCSCVGSVPPQEYITPDDEDVLEEENIVKQQAAEGMVDPNVAVQIRGLAKTYPGALNIGCCCKCKRTASYDAVKGLWVNFAKDQLFCLLGPNGAGKTTVINCLTGITPATDGDALIYGHSIRSSTGMSNIQKLIGVCPQFDILWDALSGQEHLHLFASIKGLPPTSIKSITQESLAEVRLIESAKVRAGSYSGGMKRRLSVAISLIGDPKLVIMDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFHGNNFEQSPANRDATSTINHETVKQFFKNNLDVIPKEENSAYLTYVIPHDREGLLMKFFEELQDREEEFGISDIQLGLATLEEVFLNIARQAELESAAAEGSLVTLTLTSGESVKIPVGARFVGIPGTESAENPRGIMVEVYWEQDDTGSLCIAGHSREIPVPPSVELSASPALTRRRSRRRSEPVEGIVIDPSQVSTVNFQ 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2982 966 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 491 859 IPR026082 GO:0016020|GO:0055085|GO:0140359
Prci4g2982 966 SMART AAA_5 556 740 IPR003593 GO:0016887
Prci4g2982 966 Pfam ABC-2 family transporter protein 32 438 IPR013525 GO:0016020|GO:0140359
Prci4g2982 966 CDD ABC_subfamily_A 517 751 - -
Prci4g2982 966 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 517 763 IPR003439 GO:0005524
Prci4g2982 966 ProSitePatterns ABC transporters family signature. 665 679 IPR017871 GO:0005524|GO:0016887
Prci4g2982 966 FunFam ABC transporter A family member 2 507 771 - -
Prci4g2982 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 543 745 IPR027417 -
Prci4g2982 966 Gene3D - 517 761 IPR027417 -
Prci4g2982 966 Pfam ABC transporter 550 692 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2982 Prci-Chr4 41551833 41558227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2982 558 762 Calmodulin-binding Proteins AT2G36910 21.860 2.20e-08 56.6