Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2974 ATGACGGGTGGGAGGGTGCTCATGGGTTCTCACACTAACGCTTCCAATTTGGGTCTTTTGCTTCAAAATCAAGCCGCTCCTTCCTCTTCTGACTCTCTCGATGCCTTTTTCCTTTCTGGCTCTTCCTCTTCTTTCCTCGGTTCAAGATCCATGGTGTGCTTTGAAGATGTTAAACGAGGGAAAGTATGTAACCAGTCATTCTTTAGCCCTTTTGATCATGATGAAAATGGAGATGAAGACTTGGATGAATACTTTCATCAACCTGAGAAGAAGAGGCGGCTGACCGCTGACCAAGTCCAGTTTCTTGAGAAAAGCTTTGAGGTAGAGAACAAGCTTGAACCAGAGAGGAAAATTCAGCTAGCCAAGGAGGTTGGCTTGCAGCCTCGGCAAGTTGCCATTTGGTTCCAGAATCGCCGCGCACGATGGAAGACAAAACAGCTGGAGAAGGATTTTGAATCTCTGCGGGCTAGCTATGACGGTCTTAAAGCTGAATATGATGACCTTCTTAAGGAGAAAGATAAATTGAAAGCTGAGGTTGCAAATCTCACAGAGAAGGTGCTTCTCAGAGAGAAACAAATGGGAAACTGCAAGCAGGATGACGCCAGTAAACTCAAAGAACCACAGCAAGAGCAAAAGCCCTTGTTTGACACAACTTCTGATGGCGAAGGCTCCAAAGTCTCTGTTGGGGCTTGCAAACAGGAAGACATAAGTTCTGCCAGGAGTGACATATTTGATGCAGATAGCCCGCATCACACTGATGGAGTTCACTCCGCGCTGCTGGAGCCTGGGGATTCCTCCTATGTATTTGAACCTGATCAGTCAGATCTCTCTCAGGATGAAGAAGATAACTTGAGCAAGAACCTGTTCCCACCATACATATTTCCCAAGCTCGAGGACGTTGATTACTCCGACCCGTGTGAAAGTTCATGTAGTTTTGGATTCCCAGCTGAAGATCATACCATTTGGTCCTGGTCTTACTAG 981 0.4628 MTGGRVLMGSHTNASNLGLLLQNQAAPSSSDSLDAFFLSGSSSSFLGSRSMVCFEDVKRGKVCNQSFFSPFDHDENGDEDLDEYFHQPEKKRRLTADQVQFLEKSFEVENKLEPERKIQLAKEVGLQPRQVAIWFQNRRARWKTKQLEKDFESLRASYDGLKAEYDDLLKEKDKLKAEVANLTEKVLLREKQMGNCKQDDASKLKEPQQEQKPLFDTTSDGEGSKVSVGACKQEDISSARSDIFDADSPHHTDGVHSALLEPGDSSYVFEPDQSDLSQDEEDNLSKNLFPPYIFPKLEDVDYSDPCESSCSFGFPAEDHTIWSWSY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2974 326 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 66 224 IPR045224 GO:0003700
Prci4g2974 326 FunFam Homeobox-leucine zipper protein HAT5 83 147 - -
Prci4g2974 326 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Prci4g2974 326 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Prci4g2974 326 Gene3D - 93 139 - -
Prci4g2974 326 SMART HOX_1 88 149 IPR001356 GO:0003677
Prci4g2974 326 Pfam Homeodomain 90 143 IPR001356 GO:0003677
Prci4g2974 326 Gene3D - 140 191 - -
Prci4g2974 326 MobiDBLite consensus disorder prediction 197 228 - -
Prci4g2974 326 SUPERFAMILY Homeodomain-like 69 147 IPR009057 -
Prci4g2974 326 PRINTS Lambda-repressor HTH signature 125 141 IPR000047 GO:0003677
Prci4g2974 326 PRINTS Lambda-repressor HTH signature 116 125 IPR000047 GO:0003677
Prci4g2974 326 CDD homeodomain 90 146 IPR001356 GO:0003677
Prci4g2974 326 Coils Coil 144 192 - -
Prci4g2974 326 Pfam Homeobox associated leucine zipper 145 186 IPR003106 GO:0006355|GO:0043565
Prci4g2974 326 MobiDBLite consensus disorder prediction 243 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2974 Prci-Chr4 41483980 41486216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2974 27 257 Homeobox Transcription Factor Family AT3G01470 43.220 4.47e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci4g2974 Homeodomain 1.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2974 - - cave:132174717 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2974 4 41483980 41486216 Prci4g2974 4 41483980 41486216 ECH