Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2966 ATGGGCGCCGATTACTATAACATACTGAAAGTGAATCGAAATGCGAGTGAGGACGATTTGAAGAAGGCCTACAAGAGGCTAGCGATGATTTGGCACCCAGACAAAAACCCAGTTAACAAGACGGAAGCTGAGGCCAAATTCAAGCAAATTTCCGAAGCCTATGACGTTTTGAGCGATCCCCAGAAGCGTCAGATCTATGATCTCTATGGCGAGGAGGCTCTCAAGTCCGGTCAATTCCCTCCACCTCCGCAATCCTCCTCTTCCACGTCCTCCTCGGCTTCTCGTGCTTACCAGCATTTCCAAAACCAACAACGCCAGCATACGAAGACGTCTTATCGGTTTAATCCCAGGGACGCCAACGACATTTACGCGGAAATTTTTGGGTCGGAGAATGGTGGTGGTGGTGGAGGTGGGAGAAATGGAGCGCATTGGGATGGCTTTTTCAGAACTTCAAATGGTGCGTTTGGAGGAGCGGGGAGGAAGGCTGCGGCGGTGGAGACTCTTTTGCCGTGTAGCTTGGAAGAGCTCTACAAAGGTGTCAAGAAGAAGATGAAGATCTCAAGGAATGTCTGTGACGCTTTTGGGAAGTTTCGGAATGTGGAGGAGATATTGTCTATTGAGGTGAAACCTGGTTGGAAGAGAGGAACGAAGATTACTTTCCCTGAGAAAGGTAACCAGGAGCCCGGTGTCATTGCAGCAGATCTTATATTCGTGGTGGATGAGAAACCACATGCTGTTTATAGGAGGGATGGTAATGATCTGGTGATCAACCAAGAGATCACTCTTCTAGAGTCCCTTACAGGCAAAACCCTAGACCTCACTACCTTAGATGAAAGGAGTCTCATGATCCCAGTGACTGATATCGTCAAACCTGGTACTGAGGTCGTTGTCCCTAACGAGGGAATGCCCATTTCAAAAGAGCCCGGCAAGAAGGGCAATTTGAGGATTAAGTTTGAGGTTAAGTACCCTTCGAGGCTAACTCCAGAGCAGAAATCTGAGCTGATAAGAGTTTTGGGTGGGAATGGAATGACAAATGTTTGA 1041 0.4803 MGADYYNILKVNRNASEDDLKKAYKRLAMIWHPDKNPVNKTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPPQSSSSTSSSASRAYQHFQNQQRQHTKTSYRFNPRDANDIYAEIFGSENGGGGGGGRNGAHWDGFFRTSNGAFGGAGRKAAAVETLLPCSLEELYKGVKKKMKISRNVCDAFGKFRNVEEILSIEVKPGWKRGTKITFPEKGNQEPGVIAADLIFVVDEKPHAVYRRDGNDLVINQEITLLESLTGKTLDLTTLDERSLMIPVTDIVKPGTEVVVPNEGMPISKEPGKKGNLRIKFEVKYPSRLTPEQKSELIRVLGGNGMTNV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2966 346 SUPERFAMILY HSP40/DnaJ peptide-binding domain 168 244 IPR008971 GO:0006457|GO:0051082
Prci4g2966 346 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Prci4g2966 346 CDD DnaJ 4 59 IPR001623 -
Prci4g2966 346 MobiDBLite consensus disorder prediction 79 114 - -
Prci4g2966 346 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 338 - -
Prci4g2966 346 FunFam DnaJ subfamily B member 13 244 324 - -
Prci4g2966 346 Pfam DnaJ domain 4 67 IPR001623 -
Prci4g2966 346 CDD DnaJ_C 165 326 - -
Prci4g2966 346 PRINTS DnaJ domain signature 42 62 IPR001623 -
Prci4g2966 346 PRINTS DnaJ domain signature 6 24 IPR001623 -
Prci4g2966 346 PRINTS DnaJ domain signature 62 81 IPR001623 -
Prci4g2966 346 PRINTS DnaJ domain signature 24 39 IPR001623 -
Prci4g2966 346 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Prci4g2966 346 MobiDBLite consensus disorder prediction 74 114 - -
Prci4g2966 346 SUPERFAMILY Chaperone J-domain 4 87 IPR036869 -
Prci4g2966 346 Pfam DnaJ C terminal domain 166 323 IPR002939 -
Prci4g2966 346 Gene3D - 163 242 - -
Prci4g2966 346 FunFam DnaJ subfamily B member 13 3 137 - -
Prci4g2966 346 SUPERFAMILY HSP40/DnaJ peptide-binding domain 247 333 IPR008971 GO:0006457|GO:0051082
Prci4g2966 346 SMART dnaj_3 3 62 IPR001623 -
Prci4g2966 346 FunFam Dnaj homolog subfamily b member 161 242 - -
Prci4g2966 346 Gene3D DnaJ domain 2 139 IPR036869 -
Prci4g2966 346 Gene3D - 244 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2966 Prci-Chr4 41422449 41427471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2966 5 74 C2H2 Transcription Factor Family AT1G74250 36.486 5.90e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2966 K09510 - qsa:O6P43_022791 529.25