Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2961 ATGACCGTTAAGGGTGGCACAGCCCAGGCTTGTGCAGCTTGCAAATACCAGAGAAGAAAGTGCACGTCTGAATGCCTCCTCGCTCCCTATTTCCCAGCAGACCAACCCAAGGTGTTTCAGAATGTGCACAAGCTATTTGGAGTGAGCAATATTAAAAAGACGTTGAAGAAATTGGATCCTGCCCAGAAGAAAGTGGCCATGGATTCCATCATTTGCCAGGCAAATATTAGGGATAAGTACCCTGTTCATGGCTGCTGGGAGGAAATTTGCAGGCTCCGTTACCAGATATGGCAGATGGAAGAGGAGCTTCATGTTGTTCATCAGCAGCTTGAGATTTGCAGGCAGCATTTCCAGAATCATCTTGATCATCTACCAGAGGATCATGTGGCTTCTCATTCTCAACTAGAGTTGGGCATGGCGCCTTGTTCTAATCGCCTCCAACTGTTTGATCAAATTCCTCATCCACAAGATTACAGCAATATAGTGGCTGCGTCTTTGCCCACGTCTCAGCAGCTGCAACATTCTTTCTCGCATAGCAATAATGAGGCTTACAATAATTCCCTTTACATTGATACCAAGGGTAGTGTCCCAAATCATTTGTGGGCTGAGCATCCATATGAGGATAACAATAGCAGCTCCATGGCAATACAACAACAGTCTCAGTTGGATGCGTCACAGCAGCCACTAGTCATTCAACAAGGAGAAGTAGCCGAAGATTATGATGAGATGCATCCGTTTTTTGATACTATTGATGATAGACAATCTTACGTTTATTCTAAGGAGGCTTACGAGTCAAGTTCTGAAGAATCGCTTAAAGATACGCCAAAATGCGCTGAACATGTTGCTGAGAATGAATTGAAGAATGCTGCTGCATGCTTTAGTCTTACCAGTGTCAACTGA 900 0.4444 MTVKGGTAQACAACKYQRRKCTSECLLAPYFPADQPKVFQNVHKLFGVSNIKKTLKKLDPAQKKVAMDSIICQANIRDKYPVHGCWEEICRLRYQIWQMEEELHVVHQQLEICRQHFQNHLDHLPEDHVASHSQLELGMAPCSNRLQLFDQIPHPQDYSNIVAASLPTSQQLQHSFSHSNNEAYNNSLYIDTKGSVPNHLWAEHPYEDNNSSSMAIQQQSQLDASQQPLVIQQGEVAEDYDEMHPFFDTIDDRQSYVYSKEAYESSSEESLKDTPKCAEHVAENELKNAAACFSLTSVN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2961 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 184 - -
Prci4g2961 299 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Prci4g2961 299 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2961 Prci-Chr4 41394228 41395502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2961 1 262 AS2 family AT3G47870 39.482 1.23e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci4g2961 LOB 1.2e-33 No_clan