Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2960 ATGGAGTGGCTGACCAATCGATGGGTGGCCGCTGCTGCTAGCATCTGGATCCAGTGGAGCTGTGGTGCCTCCTATACCTTCAGCATCTACTCTCCTGTTCTCAAATCCACTCAGGGCTACGATCAATCCACACTCGACACCGTCTCTGTCTTCAAAGATATTGGCGCCAACTTTGGCATCCTCTCCGGCTTGCTCTTCTCCGCCGTCACACCCTACGGTCCTCCCTCTCGAGCTTCCCCTTCGAAATCCAAACGGCAATCTTTTGGGGGTCCGTGGGTGGTGCATGCTGTCGGTGCCGTTCAGTGCTTTGCCGGTTTCATCTTCCTCTGGGCGGCGGTTGTCGGTTTGATCGGTCGGCCACCCGTGGCTGTTATGTGCTTCTTCGCTTGGCTAGGCTCTAATGGCCAGACTTTCTTGAACACGACGAATGTGGTCACCGGCTTGCGCAATTTCCCCGAGTATAGCGGCACCATCGTCGGCATCATGAAGGGATTTCTCGGACTTAGCGGAGCAATCCTGATCCAACTGTATCACACTTTTTGTGATGGCGACCCAACGGCCTACCTTCTGATGCTAGCTTGCCTACCTACATTCATCTGCCTATCGCTAATGTTTTTAGTCAGAATATATGAAGCGCACGATGTTGATTACAAGAGGCAAATGAACGGCTTCTCTGTCGTCACCTTGGCTATTGTTGCTTATCTCATGTTTATTATAGTTTTACAAAACATCCTGTTCTTTCCATCTTGGGCACGTATTTTCACATTTGCAATCCTCATGGTTCTATTAGCATCACCCTTTGGAATTGCTGCCAAAGCTCATTGGGAGGACTCGTGGAGATTTGTCCAAACCTGCTCACTTGAGAGGGGTCCTCCTTTAACAAACAACCCTAAGTTAATTACATCCTCCAGTTATTTGCCAGCAGGGGATAATATGGAATATCAGGAGCTGCCTAGTGATGATAGGCAGTTACAGTCAACTTCAGGTGATGTGCTACCTGATGAAGAAGAAAAGAACCTCTTGAGTGCCATGTGTACTGTTGAATTTTGGATGTTGTTTATAACTATGATATCTGGGTTGGGCTCTGGGCTGGCAACGATAAATAACATGAGCCAGATAGGGCAATCTCTTGGCTACAGTATTGTAGAGATCAACAATTTGGTGTCTTTATGGAGCATGTGGAACTTTCTTGGCCGTTTTGGAGGAGGCTATGTGTCGGATTACATGATGCACAAAAAAGGTTGGCCAAGGCCCTTGTTAATGGTTGCAACTCTGGGAGTTATGATTCTTGGTCATTTAATCATTGCTTCTGGGTTCCGAGGAAATCTGTATTTGGGTCCAGTCCTTGTGGGCATCTGTTATGGTGCAAATTGGTCATTGATGCCCACAATCACCTCTGAGATATTTGGTGTTAAGCACATGGGTACCATTTTTAATACCATTGCTGCAGCAAGTCCTCTTGGATCTTATATACTCTCAGTGGGGGTTGTTGGATATATTTATGACAAGCAGGCCAATAAGGAAGATAACTCATGCTTTGGCATCCACTGTTTCATGTCATCTTTTCTGATCCTGGCAGGTGTGACTTTTATTACCTTTTTGGTTGGTCTGGCTCTGTACTTACGGACTCGAAGATTCTATGAGCTAGTTGTCCTCAGAAGATTACGACGTTCTTCAAAATAA 1683 0.4652 MEWLTNRWVAAAASIWIQWSCGASYTFSIYSPVLKSTQGYDQSTLDTVSVFKDIGANFGILSGLLFSAVTPYGPPSRASPSKSKRQSFGGPWVVHAVGAVQCFAGFIFLWAAVVGLIGRPPVAVMCFFAWLGSNGQTFLNTTNVVTGLRNFPEYSGTIVGIMKGFLGLSGAILIQLYHTFCDGDPTAYLLMLACLPTFICLSLMFLVRIYEAHDVDYKRQMNGFSVVTLAIVAYLMFIIVLQNILFFPSWARIFTFAILMVLLASPFGIAAKAHWEDSWRFVQTCSLERGPPLTNNPKLITSSSYLPAGDNMEYQELPSDDRQLQSTSGDVLPDEEEKNLLSAMCTVEFWMLFITMISGLGSGLATINNMSQIGQSLGYSIVEINNLVSLWSMWNFLGRFGGGYVSDYMMHKKGWPRPLLMVATLGVMILGHLIIASGFRGNLYLGPVLVGICYGANWSLMPTITSEIFGVKHMGTIFNTIAAASPLGSYILSVGVVGYIYDKQANKEDNSCFGIHCFMSSFLILAGVTFITFLVGLALYLRTRRFYELVVLRRLRRSSK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2960 560 CDD MFS_Mch1p_like 7 531 - -
Prci4g2960 560 SUPERFAMILY MFS general substrate transporter 233 545 IPR036259 -
Prci4g2960 560 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 548 - -
Prci4g2960 560 Pfam Major Facilitator Superfamily 352 545 IPR011701 GO:0022857|GO:0055085
Prci4g2960 560 Pfam Nodulin-like 7 68 IPR010658 -
Prci4g2960 560 Pfam Nodulin-like 91 269 IPR010658 -
Prci4g2960 560 ProSiteProfiles Major facilitator superfamily (MFS) profile. 347 560 IPR020846 GO:0022857
Prci4g2960 560 Gene3D MFS general substrate transporter like domains 348 560 IPR036259 -
Prci4g2960 560 SUPERFAMILY MFS general substrate transporter 3 208 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2960 Prci-Chr4 41377912 41380735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2960 1 557 Nodulin-like Gene Family AT1G74780 56.373 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2960 - - adu:107491342 884.404