Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2955 ATGACCATGTCCCAAGGATCTCCTTCTCCTCCTCTTGTTTCTATCGAACCCTCTAACGGACCCTCGCCTGAACCCAATTCTCAAGGCCCTATATCTGATTCCCACAACGACGTCGTTCCAACGTCCAAGGAGGAAACCGCCGCCGCTCCCACCACTACCAGAAGCAACCGCCCGTCTCGCGCGTGCACCATTCGAGCTTCTTCTCGTCTCTACTCTCAAACGCAGCCGGCGACAGACCGGCGACTCAAAGGTTCGAAGAAGGAGCAGCGGCTGCCGGAGGACTCGCCGGAGCAACAGCAGCAATGTAGCAGGATTGTAACACCGCTTGTGGAACCACCATCACCTTCGCAGTTGCCTCGGTGGAACCTGAGGTCTATGTGGGAGTTAGCTTCCATACTCAATTTCTTGCATGTATTTAGACCTCTTTTGAATATCTCAGCAGAATTCTCAGCCGAAGAGTTTGAGACGGCTCTCCTTAACCCCAATGACACATTGAGTGATATACATATGCCCCTGCTAAAGGCAATCCCTCCCATTACACGAATGGCACTCACACGTGATACCTGGATAACCATATTATGCAGAAAATTGAGAGATTGGTGGCATTGGGTTGCAAATGGAGAACTTCCTATTGTTGCTTCACATGGGCTGGAAATTGAGGCATACAAATCACTTGATCCTGGGGTTCGTGTGGTCATCTTAAAGGCATTATGTGACATTCGTGTTGAGCAAGAAGATATTCGAAGTTATATTGACAACTCACTCAAACATGGCATTCAACTTTCATCATTTCGTAAAGATCGTATTGGGGGTGATTCACATGGAATTTTTTATTGGTATGAAGATGACCCCATAATTGGCCATAGGTTGTATCGGGAAGTAAGGAGAACTGAAGTGATTCAAATGAGGAAAGGGAAATCAAAAGGTTCCCAGGTCAATTCAAGTACAACATATCAGTGGGAAGCGGTTGCTACTAATTTTGATGAATTTGTAGATGTCACTGATAAGCTTTTCTCTAGCAAAAACAAAATGGAGATGTTGCTAGGGAAAAAGTTGAAGATAGACATGCTTCCTGAGATTGAGAAGGTTCAAAAGAAAAAAGAGCGATTGCTGAAAAAGCAACAAAGAGAAGCTCTTCTTCTTGATAATTTCTTGGTTGCTGATGGGATTGGTCCTGGGCGGTCACTTCGTGGTAGGAAACCTGTTACCTACACATTTGATGATTATGATCGGTCCATCAATGAGGCAATTAAGATGACAAAACGGAAACAACCATCCCCAGAGCCTATAACCAGGAGAGAAGTAGGTGAAAAACCTGAAGCTTTGACTAACGGTAAATTAAGTGGGCCTTCACATGCCCCTCAACATCTGAGCTTTGGTATGCCATCTCCAAATTCGCCTGACATTGATGATGACGAGGAAGAGCTTAAATCTGAACCATTGGATCGAAGCAACCGTCGAAGACAAAGACCTATGCGGTATTCAGAGAAAGAGTTTGTTGAAGCAATTTCAGATAATGAGGCAGACTTTGACAGTGATGATGATATTGTTGGAGAAGCTGTATATGATGAGGAATATCTCAGGCAACGTAAGCAAAGAAAGGTTTCTAGTAGCTCTGAAGGAGATGAAGAATATCAGTGGGATGAAGACCATGTTGAAGAAGATGATCAGGAATATTCATTGAGTACCAGTGAGGACAGCGGCCAGCCCCGAAAATTCAAGCCTTTGGTAGGCCGTACTAGGAGGGAAACTAAACTCCAATCTGTTGGTGAGATTCAATCAGGTCTACGACGCAGTAAAAGGGTTACCCGAAACCGAATAAACTACAGACAGTATGTGGTGTCAGATTCAGAAACAGAATCTATAAAACCTAACAAGTCTAATGCCACAGATGATCATTCAGATCCCAGTGAGAATGAGAACGGGGAATATATGATGGAAACGGAAACTGAAGATTCAGATGCTGGTGAAGATGATGAAGAGCAAGAGGATGTACAGGAAATAGACGTAGATAAGCCTATTGATTTTCCTGTAGAGGAGAGAGAACAAAACCCACCGCCTGAAAATCTAAACCGTCCCAGTCAGGAGGATGTAGAGGGCATGAACAAAAGACACTTCCTCGATTTAAATGAGCTTGCCCCTTGTGCGGGTTTTGAAGACTGTCCAAACTCGGTTATGAAAGATGAAAACAATGATTACTGA 2202 0.4423 MTMSQGSPSPPLVSIEPSNGPSPEPNSQGPISDSHNDVVPTSKEETAAAPTTTRSNRPSRACTIRASSRLYSQTQPATDRRLKGSKKEQRLPEDSPEQQQQCSRIVTPLVEPPSPSQLPRWNLRSMWELASILNFLHVFRPLLNISAEFSAEEFETALLNPNDTLSDIHMPLLKAIPPITRMALTRDTWITILCRKLRDWWHWVANGELPIVASHGLEIEAYKSLDPGVRVVILKALCDIRVEQEDIRSYIDNSLKHGIQLSSFRKDRIGGDSHGIFYWYEDDPIIGHRLYREVRRTEVIQMRKGKSKGSQVNSSTTYQWEAVATNFDEFVDVTDKLFSSKNKMEMLLGKKLKIDMLPEIEKVQKKKERLLKKQQREALLLDNFLVADGIGPGRSLRGRKPVTYTFDDYDRSINEAIKMTKRKQPSPEPITRREVGEKPEALTNGKLSGPSHAPQHLSFGMPSPNSPDIDDDEEELKSEPLDRSNRRRQRPMRYSEKEFVEAISDNEADFDSDDDIVGEAVYDEEYLRQRKQRKVSSSSEGDEEYQWDEDHVEEDDQEYSLSTSEDSGQPRKFKPLVGRTRRETKLQSVGEIQSGLRRSKRVTRNRINYRQYVVSDSETESIKPNKSNATDDHSDPSENENGEYMMETETEDSDAGEDDEEQEDVQEIDVDKPIDFPVEEREQNPPPENLNRPSQEDVEGMNKRHFLDLNELAPCAGFEDCPNSVMKDENNDY 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2955 733 MobiDBLite consensus disorder prediction 1 101 - -
Prci4g2955 733 MobiDBLite consensus disorder prediction 1 37 - -
Prci4g2955 733 MobiDBLite consensus disorder prediction 418 493 - -
Prci4g2955 733 MobiDBLite consensus disorder prediction 606 624 - -
Prci4g2955 733 MobiDBLite consensus disorder prediction 625 640 - -
Prci4g2955 733 MobiDBLite consensus disorder prediction 478 493 - -
Prci4g2955 733 PANTHER REMODELING AND SPACING FACTOR 1 53 666 IPR028938 GO:0006355|GO:0031213
Prci4g2955 733 MobiDBLite consensus disorder prediction 522 541 - -
Prci4g2955 733 MobiDBLite consensus disorder prediction 642 668 - -
Prci4g2955 733 MobiDBLite consensus disorder prediction 542 561 - -
Prci4g2955 733 MobiDBLite consensus disorder prediction 418 440 - -
Prci4g2955 733 MobiDBLite consensus disorder prediction 522 704 - -
Prci4g2955 733 MobiDBLite consensus disorder prediction 45 79 - -
Prci4g2955 733 MobiDBLite consensus disorder prediction 669 686 - -
Prci4g2955 733 Pfam DDT domain 131 176 IPR018501 -
Prci4g2955 733 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2955 Prci-Chr4 41308980 41316837 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Prci4g2955 DDT 8.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2955 - - gmx:100795519 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2955 4 41308980 41316837 Prci9g1597 9 28566870 28574191 CCT
Prci4g2955 4 41308980 41316837 Prci4g2955 4 41308980 41316837 ECH