Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g2937 ATGACCATCGCCGGTGACCTTTTCAGGGTCAATTTGCCTCAGGTCCTGGATGAATCGCCTTCAGGTTCTCAGGAACTCCATGTTCTAGCCGTCGATGACAGTCATGTCGATCGTAAGGTCATCGAACGCTTGCTCAAAATTTCTTCTTGCAAAGTGACGGTCGTGGAGAGTGGAACCAGAGCTTTGCAATACTTGGGATTGGATGGAGATGAGAACTCCATTGGCTTTAATAGTGCGAAGGTTAATCTGATCATGACGGACTATTCCATGCCGGGGATGACAGGATTTGAACTTCTTAAGAAGATCAAGCAGGAGTCATCTATTTTTAGAGAGATTCCGGTGGTGATCATGTCTTCTGAGAACATTTTGACTCGAATTGATAGGTGTTTGGAGGAAGGAGCAGAGGAATTTCTATTGAAGCCAGTGAAGCTATCAGATGTGAAACGCTTGACTGATTTCATCATGACAAGTGAAATGAGGAGAAAGGAGAAAAGATCTCAAAAAAGAAGGCGATCCGATGATCACAGTTCATCTCCATCTACGCTGCAATCAACGAAGTGTAATCCCTCTGATTCATTATCAGCTCGATTGTCACCATTGTCACCGTCTTCCATGCCCTCCAAGAGATCTAGATTACAAGCAGATATTGATTAG 654 0.4404 MTIAGDLFRVNLPQVLDESPSGSQELHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDENSIGFNSAKVNLIMTDYSMPGMTGFELLKKIKQESSIFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVKRLTDFIMTSEMRRKEKRSQKRRRSDDHSSSPSTLQSTKCNPSDSLSARLSPLSPSSMPSKRSRLQADID 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g2937 217 MobiDBLite consensus disorder prediction 177 210 - -
Prci4g2937 217 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 181 IPR045279 GO:0009736
Prci4g2937 217 SMART REC_2 26 151 IPR001789 GO:0000160
Prci4g2937 217 CDD REC_typeA_ARR 28 150 - -
Prci4g2937 217 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Prci4g2937 217 SUPERFAMILY CheY-like 25 169 IPR011006 -
Prci4g2937 217 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
Prci4g2937 217 MobiDBLite consensus disorder prediction 158 217 - -
Prci4g2937 217 Gene3D - 26 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g2937 Prci-Chr4 41133096 41135144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g2937 26 169 Response Regulator Gene Family AT5G62920 79.167 8.79e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci4g2937 Response_reg 2.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g2937 K14492 - gmx:100527518 255.758